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Clone Read LE_HBa0130A01_T7_64129

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0130A01_T7_64129
Primer
T7
ID from Seq. Facility
LE_HBa_130_A01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 805 raw
Sequence
>LE_HBa0130A01_T7_64129 (raw untrimmed)
GTTTAGATTCCGGCGCACTTCTCCCCCTTAACAAGGGCCGNNNNNNNNTTTTTGGGGANNNNGNNNNNNNGAGGGACCCTGAAAAGGGGAGGNGNNGGGT
TANTGGGGGGAGNGNNNNNNNGNNNNNGAGANNGGGNGNNAGGAGAGGGGAGGANNNGGTTTCTCTAGAGGGGGAGNNNNNNGNNTTTTNNGNNGNGNNG
NGGGGGGAGGGGGGGGNGNNAGAAAGAAGAAGGGGGGAAGGGGGGAGGGAGGGNAAANAANNNAGANGAAGAAAGAAGAAAAGGGAAGGGGAGAAGAGGA
GGGAAAAGAGGAGGGAGAGGGAGAGGAGAGGGAAGGGAGAGAGAAGGAGG
GGGGGGANGAGGAAGGGAGGGGGGGAGGAAGAAAGGGANAAGGAAGGAGA
GAGAAAAGAGAGGGGGGGNGAAAGAAGGGGAAANGGGGAGGGAGGGGGGGGGGGGAGAAAAGAGAAAGAAGAANAAGAAGAGGNGAGAAAAAAGGAGAAA
GAAGAAAAGAGAAGGAAAAGNAGAAAGAAGAAAGGGAGGANGGAAGGAGGAAAAAGAAAAAGAGGGAAAAAGGAGGGGGAAGAAGGAGAAAGGGGGAGGA
AAGAGGAAGAGAGAGAGAAAGAAGAAGAAGGAAAAGGAAAGGGGAGGGGAGAAGAGAGGAGAGGGAGGGGGGGGGGGGGGGGGGGAGAGAGGGGNGGGAG
GGAGGGAGAGAAAGAANGNAGAGAGAAGAGGGAGGAGGAGAGGAAGGGAAAAAGAGANAGAGAAAGAGAGGGAAGGGAGGGAGAGGGAGAGAGGGGGGAG
GGGGG
>LE_HBa0130A01_T7_64129 (trimmed for quality and cloning vector)
GGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.643231
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0130A01
Clone
Clone name
hba-130a1
LE_HBa0130A01
P130A01
Clone type
BAC
Contamination
none
Estimated length
95,524
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found