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Clone Read LE_HBa0130P08_T7_64863

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0130P08_T7_64863
Primer
T7
ID from Seq. Facility
LE_HBa_130_P08-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
718 trimmed for vector and quality, 853 raw
Genbank Accession
DU075018
Sequence
>LE_HBa0130P08_T7_64863 (raw untrimmed)
ACCAAAGCTGGTCCCGGGGGAATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTAACTGATCAAACAAGTCATCCTTGCGAGGAAGAGGATACATGTT
CTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTCAGAAACAAAACTGGAGCACCCCAAGGAGATGCG
CTTGGTCTAATAAAGCCTTTGTTTAACCACTCTTGAAGTTGGGTTTTTAACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGC
GAGTACCCGGTTCAAGGTCAATAAAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCCGAAACTCACGGACCACTGA
AACCGACTCAATCAAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTTCTAACCATTTTCTTAGCACGAAGAAAGGAG
ATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGAATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATGG
CAAATTGTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGATCCCTCCAAAGTTCAC
CAAACAAGAACTATATACTTTTTCCACTACCACAGACTCACCCCCCGGAGTAGAAACACGAATAGGCATATCAAGTAAACTCACAATGTTAATTTAGACC
ATTCCCAAATGATGAAGATTATAAGAATATGTGGATCTTTTTTTTTTTTTTTT
>LE_HBa0130P08_T7_64863 (trimmed for quality and cloning vector)
AGCTTGTAACTGATCAAACAAGTCATCCTTGCGAGGAAGAGGATACATGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAA
CTCCCATCCTTCTTCTTCAGAAACAAAACTGGAGCACCCCAAGGAGATGCGCTTGGTCTAATAAAGCCTTTGTTTAACCACTCTTGAAGTTGGGTTTTTA
ACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGGTCAATAAAGAAATCAATATCCCTATCTGGTGG
CATACCAGGAAGATCTGCAGGGAACACATCCCGAAACTCACGGACCACTGAAACCGACTCAATCAAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCC
AAGAAAGCTAAACACCCTTTTCTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGAAT
CTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATGGCAAATTGTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAAC
CATTTCTAAGATAACCAAATCTACATAAGTGTTGATCCCTCCAAAGTTCACCAAACAAGAACTATATACTTTTTCCACTACCACAGACTCACCCCCCGGA
GTAGAAACACGAATAGGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.980058
Expected error %
0.940928
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT66771.1| Score 345 E Value 7e-94 Identity 23.00% Align. Length 713bp (99.30%) Frame 2
putative polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38745.1| Score 314 E Value 1e-84 Identity 23.50% Align. Length 629bp (87.60%) Frame 2
putative polyprotein, 3'-partial [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0130P08
Clone
Clone name
hba-130p8
LE_HBa0130P08
P130P08
Clone type
BAC
Contamination
none
Estimated length
56,812
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found