Clone Read LE_HBa0033A22_SP6_6570

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0033A22_SP6_6570
Primer
SP6
ID from Seq. Facility
LE_HBa_033_A22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
827 trimmed for vector and quality, 936 raw
Genbank Accession
Sequence
>LE_HBa0033A22_SP6_6570 (raw untrimmed)
GTAAACAACAAGCTNCGTCTTAGCTCAGTGGGTAGAGCGCGTGGCTTTNTAACCACGTGGTCGTGGGTTCGATCCCCACAGACGGCGCTACTTATTTTTT
TTCTCATTCAACAAGTTTATTTTGCATAATTTTTGTTTTAATATCTTTTTCATTCAACAAATTTATTTTGCATAATTTTTGTTCTACTTTTTTTCTCTAC
ATTTCCGTCTTGTCATCTTCTATTTTCCCTTCCCTATTATATAATTTATTCTTAAAATGCAAAAAATTAATTAGACTAACTTTGTATTCGAATTTGTGGC
CAATTTCTACTTTTATCTGTGAAATAATAAGATACTTATTACTTCATTAGATCCTTAGGATTTGCAATACTTATGATTTTTTCCATTAGATCATAAATTT
GTCAAAATTTTAGTAAAAATCTTACATTGATCAAGTAACATAAATAAAATCATTGTTTCAGCTTTCAAATATGCCAAACAACTTAGAAGGACAAGCATAT
TTATTAGCTTGGATTGTCAAAGGTTGAGTCAAGATTTGAAAAGTGACTCAAAATTTAGCATGAGTCACTTGCTCAACCAAATGATCGATCTGGGCTTTAG
GAACCTTGAGCTCCACATCATTTGCCACATTCCTACTCACATAAGCTCTTCGAAGAGCCATATCCTAAAAATACAGGACAAGAGTTAGGAGAGAGACCTG
AAATGAACTCTATGATACGACTTTAGAGTAGTGAAAGAAGTGAAGCTTCCTTATTTCTTTGTAGCCTTCTATTCATAAATGTGGCATATAATATAAGTTC
ACGTGCTTCACATTTATGAACAATATTCTAATCAATGCGGTTTTTCAAGCCTAAGACCTTTTCTAAAACTTTTTGCTCTGAATATCAAGTTTCTTACGAA
TCCAAGTATAACCTAAAACTGACATGACAATAGGAA
>LE_HBa0033A22_SP6_6570 (trimmed for quality and cloning vector)
TCTTAGCTCAGTGGGTAGAGCGCGTGGCTTTNTAACCACGTGGTCGTGGGTTCGATCCCCACAGACGGCGCTACTTATTTTTTTTCTCATTCAACAAGTT
TATTTTGCATAATTTTTGTTTTAATATCTTTTTCATTCAACAAATTTATTTTGCATAATTTTTGTTCTACTTTTTTTCTCTACATTTCCGTCTTGTCATC
TTCTATTTTCCCTTCCCTATTATATAATTTATTCTTAAAATGCAAAAAATTAATTAGACTAACTTTGTATTCGAATTTGTGGCCAATTTCTACTTTTATC
TGTGAAATAATAAGATACTTATTACTTCATTAGATCCTTAGGATTTGCAATACTTATGATTTTTTCCATTAGATCATAAATTTGTCAAAATTTTAGTAAA
AATCTTACATTGATCAAGTAACATAAATAAAATCATTGTTTCAGCTTTCAAATATGCCAAACAACTTAGAAGGACAAGCATATTTATTAGCTTGGATTGT
CAAAGGTTGAGTCAAGATTTGAAAAGTGACTCAAAATTTAGCATGAGTCACTTGCTCAACCAAATGATCGATCTGGGCTTTAGGAACCTTGAGCTCCACA
TCATTTGCCACATTCCTACTCACATAAGCTCTTCGAAGAGCCATATCCTAAAAATACAGGACAAGAGTTAGGAGAGAGACCTGAAATGAACTCTATGATA
CGACTTTAGAGTAGTGAAAGAAGTGAAGCTTCCTTATTTCTTTGTAGCCTTCTATTCATAAATGTGGCATATAATATAAGTTCACGTGCTTCACATTTAT
GAACAATATTCTAATCAATGCGGTTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.946324
Expected error %
0.36227
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0033A22
Clone
Clone name
hba-33a22
LE_HBa0033A22
C03HBa0033A22
P033A22
Clone type
BAC
Contamination
none
Estimated length
119,991
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found