Clone Read LE_HBa0186J23_T7_66141

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0186J23_T7_66141
Primer
T7
ID from Seq. Facility
LE_HBa_186_J23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
36 trimmed for vector and quality, 861 raw
Sequence
>LE_HBa0186J23_T7_66141 (raw untrimmed)
GCATTTACATCTCCTCATCCTGTACAATGATCCTCTTCGAGTCTCCAGCCTTGGATGCAGCTTGCCCCTATTTTCACTGTCTTACCCTTCTCTATACTAC
CCTTATAATCACAATAGGACTTTCTTACCTTCTTACATAGGCTCAGGGTCAGGTAGGTGA
TATTTAGGTATACTTTAGTGACTTTTTTCCCTCCTTGACA
CACTCCGCTAATCCTTCCACTTTCTATCATTTTATTTTGTCCAGATTCCCATATACTTTCACCTTGCTATAATCACTTCTTTCTCCATTTTTGTAATAGA
CTCTCTTCTTTTCTTGCATGTATTTCCAGTATAAATTTCATTTACTATACTTCACTTTCTACTAATTCTTGAGTCACCTTACTTTTATACTATCACTCAC
TTAGTGCTTACTCCCCCGCTTTCACTAATCATCCTTAAGATAAGATCTTCTTAAATTCATGGTTGTTGCCATGAGTAAAACATCCACTATACCCATTTAC
CGAGTATAGGTGAATAATCAAAATGATGATAAATCCATAACAACACACCCACAAATTTCATCTTTTTTCGAAATAATAAAGAATTACTAATTATTCATCA
ATTATATGTCATCCTTGTCATCCTTCTTATTGTCCTCTATAGCGTTTTCATTCTGGCACTACCTAAAAATAGTGACTAGATACATTACATCTATATCATT
GCGCATACATAATAAGTTACACAATTCATTTGTGGAGTCACATATTAAACTCTATACACTAAATATATCGAAGTCAATTAATTCATGATCATATGACTTA
ACAACTATACTATAAATGTTTCCTTTCAATAAACCCCCACTACTTACCCACCAACCAATCC
>LE_HBa0186J23_T7_66141 (trimmed for quality and cloning vector)
TATTTAGGTATACTTTAGTGACTTTTTTCCCTCCTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.660401
Expected error %
1.22868
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0186J23
Clone
Clone name
hba-186j23
LE_HBa0186J23
P186J23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found