Clone Read LE_HBa0136D24_T7_69695

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0136D24_T7_69695
Primer
T7
ID from Seq. Facility
LE_HBa_136_D24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1241 raw
Sequence
>LE_HBa0136D24_T7_69695 (raw untrimmed)
CACGTTCACGCGTGCGTGGTGCAGNGANGCGCTCGTGTNATGGTCTTAATCCGTATACTCTCTCGTCCACTTCTCTCACCGTCTCTATCTCAGTCACCGA
TCTATCTTTCGATGTNATCGTCTTATCAAACGGATATTAATCTGTCTCATATTTCTTCACTGTGATGCGTGTGNCTCTTCCGCGAAACTGACTTTATACG
GCTATGATATGACTTCTCTATCATCGCGGCATCACTCTCAACCTACTGTACTGTCGCGCATACAGGCCTACTACTACCTNATGACACCACGCTCATGATG
ATTCGTGTGTNTNCATATCCATCCTGCGCTTGATACGACATACTCATGTGTTCCTACGCATCTTACAACTGCTATCGTNCTTCTCACATGAATACNCACT
GTACAATGTCTCTTCGAACGCTACATACATGCTTATCACATTCTACATCTTAACGCTATTACTTTATCTATCTATTCGTGCAGCTCTCACNTCCTCTANG
TACGTCATCTTATATATTCTCGTTCATCGTATNTAGCTAGATCTTGTATATGACTCAATGCCGATGATGGCTTTNTGGTGCGTAACCCTACTCTTTTCGT
AATCTATTACCTACACGCACATTACTTGCTGTACTTCGGCCTCTTGCGTATTATACTAGTCACNAGACCGTGACGTAGATCATCACTAGTGCTGCTCACT
CTCACTGACTATCATACTAGTACTACTAGATGATCTATTACAGTTCACGCTTGTTGTATCCTTGATCACACACTCCNCTTCTCTTCTCTCTAGCTCTCTC
GCCTNCTCCACTCTCGCCACACCCACCTACTCTTNACATACCCTCGACTCTCTACCGTCTCTTCGCCTCACTCACTCTNCTCCTCTCTGGTGATACATGT
TATAGTTCTGCACTACCTGATCGTATCCACATAATACAGACTCTGTNAGACGACCACGCATNATTATACTCTACAATACACTATATAACTCAGANGTANA
CACGCAACANCTCACACACATATCTACTCATAGATAACGAATCATCGCGCTGCTCTCCCGCCGCATACTACCTCGCGCGTCTCTCTGCTCTTCTCGCTTA
CCTGANTCCTCTACACTCTTACTCTACTCATCATAGACTTCTTACAATATAGTATTNCTCTANCATCTGTCTCATCCCTCTATGTCGCNCTGCTCCATGT
GACTACTGACTNATCTACTATNCTCGATCACATCACTCTTG
>LE_HBa0136D24_T7_69695 (trimmed for quality and cloning vector)
AC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
5.31548
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0136D24
Clone
Clone name
hba-136d24
LE_HBa0136D24
P136D24
Clone type
BAC
Contamination
none
Estimated length
110,942
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found