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Clone Read LE_HBa0154L01_SP6_75408

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0154L01_SP6_75408
Primer
SP6
ID from Seq. Facility
LE_HBa_154_L01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 847 raw
Sequence
>LE_HBa0154L01_SP6_75408 (raw untrimmed)
ATCAGCAATTGATTACATATAGTAGGAGAAACGCGGGGGGGAGCGCCCCCGCGCAGATAAGACGTTGCATTGCCTCACCGGACCCCCACTATACACTTTT
ACTTCAACATGTTTATCCGTTACTGCTACTCTTTTTTGTTTCCGCACAAAAAAAGAAAAAGCTCNTATTGGTGAGAGAAGTTGTATATATGTTTGTAGAG
GGAGGTTTAGGNTGTTTGTGAGGAGAGGGTCGCTCTTATAAGATACCGCTAAACGGTAAGAGGGGGTCATGCTAACTTACATATCAACACATCTGTGCTT
CATACCTACGTCATTCTTTCATACTACTTCTCGATCCTGCACGTGGGACTACACAATTGAATCAGTAAATTACGACGACGATGTCAAAAACAACAACCGA
TACATCTTAATACTGACAAGTATGGCCCACCCCCTTTTTTTTTGGAGGGAGAAAAAAACAACCCACACAGGACCGCCCGCGCCGCCAGAGAACNGCCCAG
CAGGAAGAG
GGGGGGGGGGAACGAAAAGGCGCCAGGGACAAGAAGCGCGCAGCGAGAGCGCGAGCGGCGGAGGCGAGCGACGCGAGACAGACGAACACAA
AGACGCGCGCGCCACAGACGCACCACACACGCACGCAGCCCACCAGGGACNGACACAGCACCGCCGANCGAAGACACCAGGANAAAAGGAACGCGAGCGG
ACAAGCAAACAGAAGAGAGAGAAAGGAAAAAAACGAACAACACACACAAACAACGAACAACGACAAACAAACCACCAAAAGAAGCAGAAACAAAACAACA
AAAACAAACAAACGANCAAAGAGAAAGAAAAACAAACNACAAAACAA
>LE_HBa0154L01_SP6_75408 (trimmed for quality and cloning vector)
GGGGGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.909223
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0154L01
Clone
Clone name
hba-154l1
LE_HBa0154L01
P154L01
Clone type
BAC
Contamination
none
Estimated length
120,764
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found