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Clone Read LE_HBa0154L01_T7_75409

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0154L01_T7_75409
Primer
T7
ID from Seq. Facility
LE_HBa_154_L01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1189 raw
Sequence
>LE_HBa0154L01_T7_75409 (raw untrimmed)
CGTATAGAGGCNTCAATGCTAGTGNATGTAGGCAGATCTGAGAGGAATATGATATTATCTATATAATCGACTCGNCACGATATATCTGTCGTCAGATCGA
GCTGAGAGTGTNAGTGTAATTGATCGAGATGTCGAGTCGCAGACGCGACGGTTGTAGCGGCGTNAAGTGATGTGTGCGCGCGCTCACTCAGTGTTCTCTC
TGTCCACAGGGTGTTATACTGCCTTATATCTATCATCACTTGAGTAGCTGTGACGACTGACATCANANATTACGAGACGANCTACTACTGTGACTTCTAC
TCGGCATCATGCGTGAGAGTGAGATGATGTACTAGAGACCTGCCGTACGCTCTGTATTGACTCAGCAGACGCAGTGATACATCCNTGCGATCTATTGCAC
ATGCTACTAATCTAGCTCTTACGCCTCGTGAATACGGCGACTGGGCTCTCGCCACGTCNCGACTGCGCACTGNACGCTTGACACAAGGNCTCTCTACGTC
CATATNATCATCAGTACACATACACGAGCTAGACCACTGATNACGTCATGAGTTGAAGTGTATAACTGACTGAAACAGTTATATGCAAAGTATATGGTCT
GTATCTATTATGTCGTTGGATCGATCGTATGTGGCTGCATCTATGTGGTCTAGCACACATTCCTGATCATATGATATCTATGCATCATTCGTAGACGTCA
GTGTGACATTCGCACAAGATGGCNCGGNCGCGGTGATAGAGAGACGACGCATACGCGACGCGGATACACGCACCTNGACATGATGCAACGAGAATGTGAC
AACATACACCGCCAGATCACACGACAACGCATAACNGCGTAACGCACACAACTGCTGTGGCGACCGTACAACAACACGACAATCACACNCGACTGCTGNA
TCATGAGCGCGTCATCGTACGGGCGATAGCCTATGTGGACTGTAAGGAATCGTTGCATGTATCTCAACTTTNACACAACAGATGAGCAAGCTGTATATTT
ACGTACGCGATCTGATGTCGAATCTGATGANGGTGTCCAGTAAGATACNTACCACATACTGCCTCGACACTTAACAGCCAACTCCTAAACCATGACCTCN
GAATCTCCTCTCACCTGCATANATACTATACATCCATATCTTGCACTTCGACTGCTNCATTCTTCACCGTATCGTGNCGTCTGCCTTAT
>LE_HBa0154L01_T7_75409 (trimmed for quality and cloning vector)
GC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.828516
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0154L01
Clone
Clone name
hba-154l1
LE_HBa0154L01
P154L01
Clone type
BAC
Contamination
none
Estimated length
120,764
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found