Clone Read LE_HBa0160D23_SP6_76604

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0160D23_SP6_76604
Primer
SP6
ID from Seq. Facility
LE_HBa_160_D23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
786 trimmed for vector and quality, 904 raw
Sequence
>LE_HBa0160D23_SP6_76604 (raw untrimmed)
GCCCACGCTTTTTGCCGTTATATGTAAACTTGACAGCTTCAAAATGGTTAGGATGGCTCTGAGATGTCTGTTTTGATCACATCAGCTTCACAGAATACTA
GAGAGTCATCGGCATACAACAACTGAGATATTTCCATTCCTTCAATGGCATTTGGTTGAGATCCAAAGCCTTTGATCAAACCATTCAACTGTGCAACCTT
GATCATATCATATGACTAAGTCCTTCCATGACTATCAAGAATAGAAAAGGTGGCAACCCCTTTAAGATTGAAAAGAACTCTCAGGTCCACCAAAAATCAA
TACTGAGAATTTGACATTAGAAATGCAAAACCATTTATTAATACTGAGACCTTGCATTTCTAATGGAAATTGGTATGTTTATTTTTTATTTTGAATTTGT
ACGTGTATTTATAGGATGATCAGCGGTAATTTGTGGACACCTTATTCAATGAGAAGACATTTCAAATACTCTTTAAGAAAAACTAGGAAGTAAGACTTCC
AAAAACATAAGTTACCTTCCAAATGACATGTTAATATCATTCTCAACAGGGGCATGAATCATTGACTGTAGCTGCAGAATTACAGTAGACAGCAGCATTG
TCTGGCCATCCGGATTTCGCTGCACCGATCACACAAAACATGCTTTTAAAGATGGTATATTCCAAGAAAGCATAACACACAACTAGAAACCTAACAAAGG
AGATAGTAAAGGAAGCTCTGTTAAACGATATCTAAAATCACTCTGAAAGCATAACATACAACTGCTTGAAATATCTAACCATTACAGTTAAGATGCCAAC
CTGACAAAAGTTCTTAAAAAGATAGTCAGCTGCCATGAATTCTTGCTTACTAGAAGTGCGCAAAACCATCTGGAAGACAGATTTCAAGCAAGTTCTAAAT
CTGG
>LE_HBa0160D23_SP6_76604 (trimmed for quality and cloning vector)
ATATGTAAACTTGACAGCTTCAAAATGGTTAGGATGGCTCTGAGATGTCTGTTTTGATCACATCAGCTTCACAGAATACTAGAGAGTCATCGGCATACAA
CAACTGAGATATTTCCATTCCTTCAATGGCATTTGGTTGAGATCCAAAGCCTTTGATCAAACCATTCAACTGTGCAACCTTGATCATATCATATGACTAA
GTCCTTCCATGACTATCAAGAATAGAAAAGGTGGCAACCCCTTTAAGATTGAAAAGAACTCTCAGGTCCACCAAAAATCAATACTGAGAATTTGACATTA
GAAATGCAAAACCATTTATTAATACTGAGACCTTGCATTTCTAATGGAAATTGGTATGTTTATTTTTTATTTTGAATTTGTACGTGTATTTATAGGATGA
TCAGCGGTAATTTGTGGACACCTTATTCAATGAGAAGACATTTCAAATACTCTTTAAGAAAAACTAGGAAGTAAGACTTCCAAAAACATAAGTTACCTTC
CAAATGACATGTTAATATCATTCTCAACAGGGGCATGAATCATTGACTGTAGCTGCAGAATTACAGTAGACAGCAGCATTGTCTGGCCATCCGGATTTCG
CTGCACCGATCACACAAAACATGCTTTTAAAGATGGTATATTCCAAGAAAGCATAACACACAACTAGAAACCTAACAAAGGAGATAGTAAAGGAAGCTCT
GTTAAACGATATCTAAAATCACTCTGAAAGCATAACATACAACTGCTTGAAATATCTAACCATTACAGTTAAGATGCCAACCTGAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957417
Expected error %
0.123446
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0160D23
Clone
Clone name
hba-160d23
LE_HBa0160D23
P160D23
Clone type
BAC
Contamination
none
Estimated length
76,821
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found