Clone Read LE_HBa0029A15_T7_91805

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0029A15_T7_91805
Primer
T7
ID from Seq. Facility
LE_HBa_029_A15-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
772 trimmed for vector and quality, 838 raw
Genbank Accession
DU054349
Sequence
>LE_HBa0029A15_T7_91805 (raw untrimmed)
TTTTTTCTTCTCTCCGTCATCTACGGCCCGGGGCTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGAACGCAATGTGTAAAATCAACCGCTAAGTAG
ATACGTGCATTTTTTAGAAGATTGGCCAAGGGTGATATCGATGTTTGGTATTATAATTGGTCGGAATTAGGCCCATTGTGGAAATATCTTCTTCCTGGAC
ATTATTCTAGACAACCATAGAAATTGGGATGGCTGGGATATATATCTATCCACCTGATTATGTTAGAATCAAGATCGCTCCATGACAATTGTTATTAGGG
AAAATATCCCTGATGGAGCAAATTTGGACTATGAAAACAACAGAATTTTTCAATATTGCTTCTTCTTGGCAACTCTCAAGACAAAAAAAAGCAAAAATTG
GATTAATTCAATGACTGGGCAAAAAGTTGTCCCCTTCAAAATGAACTTTATTGTTTGGAAGGCTTCGAGAGATAGGCTCCCCGCTGATGCTAGAGTAGCT
AAAATGGGAATCGCTATTAAAAGTACTTGTTGTTGCTGTAGGATTTCTACTTTTGAATCTACTGACCATCTTTTTTGCAGGGGAAAAAAATTTATGCTCA
AGATGTCTGGAAAGTCATTTGTGGTTTCAATTGGAATTCCTATCAAGGACATACCTCTCAGGCAACACTTAATCGATTAGGGGAGACAAAAAGACTTCTA
AATCAAGTGTGTAGTATCCATTTGTCAAAATGTCTCCCTGCCCCTCTCACTATATTGGGAGATCTGGAAATCACCAAGTTGAAGGCCAAATTTGGCTCCC
AAAAGAATCAATGGGAAACCAAATCCATTTTCCCAAAA
>LE_HBa0029A15_T7_91805 (trimmed for quality and cloning vector)
AGCTTGGAACGCAATGTGTAAAATCAACCGCTAAGTAGATACGTGCATTTTTTAGAAGATTGGCCAAGGGTGATATCGATGTTTGGTATTATAATTGGTC
GGAATTAGGCCCATTGTGGAAATATCTTCTTCCTGGACATTATTCTAGACAACCATAGAAATTGGGATGGCTGGGATATATATCTATCCACCTGATTATG
TTAGAATCAAGATCGCTCCATGACAATTGTTATTAGGGAAAATATCCCTGATGGAGCAAATTTGGACTATGAAAACAACAGAATTTTTCAATATTGCTTC
TTCTTGGCAACTCTCAAGACAAAAAAAAGCAAAAATTGGATTAATTCAATGACTGGGCAAAAAGTTGTCCCCTTCAAAATGAACTTTATTGTTTGGAAGG
CTTCGAGAGATAGGCTCCCCGCTGATGCTAGAGTAGCTAAAATGGGAATCGCTATTAAAAGTACTTGTTGTTGCTGTAGGATTTCTACTTTTGAATCTAC
TGACCATCTTTTTTGCAGGGGAAAAAAATTTATGCTCAAGATGTCTGGAAAGTCATTTGTGGTTTCAATTGGAATTCCTATCAAGGACATACCTCTCAGG
CAACACTTAATCGATTAGGGGAGACAAAAAGACTTCTAAATCAAGTGTGTAGTATCCATTTGTCAAAATGTCTCCCTGCCCCTCTCACTATATTGGGAGA
TCTGGAAATCACCAAGTTGAAGGCCAAATTTGGCTCCCAAAAGAATCAATGGGAAACCAAATCCATTTTCCC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.957333
Expected error %
1.41653
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38805.1| Score 55 E Value 8e-12 Identity 47.10% Align. Length 459bp (59.46%) Frame 1
hypothetical protein PGEC747E24.5 [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0029A15
Clone
Clone name
hba-29a15
LE_HBa0029A15
P029A15
Clone type
BAC
Contamination
none
Estimated length
142,220
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found