Clone Read LE_HBa0043F15_T7_93581

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0043F15_T7_93581
Primer
T7
ID from Seq. Facility
LE_HBa_043_F15-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1174 raw
Sequence
>LE_HBa0043F15_T7_93581 (raw untrimmed)
ACAACTACATGTTATGGCGCACGTATATTACCAAGCGCGCGATAGAACCTGGCGATCACGANCATAAAATCGCGCCGTGCTGGACGCGTGGGAATGCTGA
CAGCATAGTAACCCTCTCCTATGAGGGGGCCTCCCCACNNCAGACCCCGGNGNACGCAGCCGGGGAGAGGGCCCCCCTTTCACAGGGCCCCGCGGCGCGG
GCGAACGAGGAAACACGCCACAAACAGACCAGACCCAGACAACACGACGAGAGGAGAACGAGCACGGGCACGCAGGCCACAGCCACCACGCCGGCCCCGC
GAGGCAGCCACGAACGGGCGCACACAGGGCGCGAAAAGGGAGAACGAAAGAA
AAAACGAAGGGAAGAGGGGAGACGACCACAAGCCCCGCCAGGCACGCG
GCAGGCCCGACGCGNACCACCGGCGCCGCCGGCGCCAGGCGCCGGGGCGGGACGCGGCGCCCCGGACCGCGCGCCGCACGGAGCGGGGGAAGCGGCGAAC
GCGCACGAGAAGGGGAGAGGACGGAGCGACGCGCAGAGAAGAGGGAACGCGAGACCCACGGACCCGCCGCCGGCGGGCGGAGACGGGGAGGCGCCGGCCG
CGCGGCGAAGCGCCAGGGACGCGCGGGACCNACGAGAGCGCGGGAGCGAGCCGCGGCCGGCCCCCGCCCAGGCGCCGCGCGAACAGCGGGCGGGCGAACA
AAGGAACACACGCAGCGGCCAACCCCACACCGCAACGCCCAGCTGCCGCACTCGACATCTCATCTACTCCTCGCTCTCATGCAACGTACCCGCTATAGCA
TGCTACCACCCCGTATTAGCGAGTCGACGACTCCAACCCAACCCATGATCCAGATAACTCCCGTGCGCACCTCCAGCGTGTTGCGGGTCGAGCGCCTGAC
TACCGTAGTTTGCTATGCTCAGCGACCCGCCTCTCGCCCACAGTCGTCTCCGCCCCTTACCCCCCCCCAAACAACTCGGACCAACAACCTCAGAACGCAC
ATGGATTGTACGGAACGACACCGAATATGACTACACTGCACGTCGTCAGGTTCGAGAGCAACGATTTAAAAACGAGTCTTCTTTCCTATGACATGATGAC
TGATAGGACGCGTACACTGCGTTGTTGCGTGGCGGTGGCCGGCGTTGGTATTACTACCGTGCTGTGTTGTGGCC
>LE_HBa0043F15_T7_93581 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
4.36881
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0043F15
Clone
Clone name
hba-43f15
LE_HBa0043F15
C03HBa0043F15
P043F15
Clone type
BAC
Contamination
none
Estimated length
81,846
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found