Clone Read LE_HBa0129O05_T7_98601

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0129O05_T7_98601
Primer
T7
ID from Seq. Facility
LE_HBa_129_O05-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
11 trimmed for vector and quality, 709 raw
Sequence
>LE_HBa0129O05_T7_98601 (raw untrimmed)
TATTATTCGGGCCCGGGGGTCCTCTACGAGTCGACTGCAGGATGCANCTTCGTATTAAGAAATACAAGACCTTCAGACTTCACAATTTGAATTTTGTTCT
CGCATCACGCCTTAAAAATCCACAGACCATATATTTCCCCCTTAAAAAAAAATAAACACAATGTTGTCATCCATCAATCAGGAAGCTGTACCTCGTATGT
GGTCCCTTCAACGGAAGCNNTGTTGCAANNNAAACCTATTCCTGTACTCATCCCGCCGGNCTTGCACAGGCGGCCTTGTTTATGGGATNTAAACGCTTTT
ACGTTTTTGAAAAGGAATTTATATTCTTAATATGTTGAGTGCGATAAATGACTTTTTTTGTTTATGTCGGAAACTGGTTGGCGAATTTAAATTTTATTTT
AATTTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNTCAANNCNNCCTCNCCACCCGCATTTGGGAATGGTTTAAAGGTAAATTGTTTCTATTTAACCTTTT
TCCGCACCTTTTTTTTTTTTAAACGNNNNAGTTGGGGAAAAATAAACAATTAGAGGTTTAACTTTTGCCCGATTTAATAAAAAAAGGGTGTAAAGACAAA
ACACCTGCTAATAATTCTACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGNNNNNNNNNNNNNCCCNNNNNNNNNNNNNGNNNGNNNNNNNNNNNG
NNNNNNNNN
>LE_HBa0129O05_T7_98601 (trimmed for quality and cloning vector)
ATTTGAATTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.294771
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0129O05
Clone
Clone name
hba-129o5
LE_HBa0129O05
C08HBa0129O05
P129O05
Clone type
BAC
Contamination
none
Estimated length
38,988
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found