Clone Read LE_HBa0141B13_T7_99529

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0141B13_T7_99529
Primer
T7
ID from Seq. Facility
LE_HBa_141_B13-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1210 raw
Sequence
>LE_HBa0141B13_T7_99529 (raw untrimmed)
ACACGGGGACTATCTCATCATATGNNGCGAGAGGTGTGGGAGATCTCCATATTTATGTNGATGTCATGATGTGTCGTGANTCGATGTCAGATGTATCATN
ACATGGTTNAGTGNATATNACATNTCATGACAGACCTCACTGATGTNATACGAGAGTTNTNATAACACTGCTGATGTCTCATTTGAGGTNAACTGTCATG
TGCGAGTTNGATGCGTATAGCTTGACGTCCTGCGCTCATATACGTGCATNGGCCTCTGCGACACCATCTGANTTGCGACCTCGTACACGANGCATCTGCC
AAGNCCGNTAGTACTCCGATGTATGCGNCTTTATNTGTCGATCTCGCAGCTCTGTGTTGCTAGTGCGTCTTAGTTCNAGTCGCATTACTGTTGTTCTCTG
TATGTACTTTGACCGCTCGTTCGTTGTGGNAGGTGCGGTGCGCGTCTAGCGCGTTGTCGCTGATGCCGCTTCGCGATCGGNCGCTGCGAGGACGCGCGTA
GTTAGTGAGATCTCCACCACTTCTAGNCTCGCTACATCTACCTGACTGCTTAGCTCCTACACTTACATGCATCTGATGACGATATGCGCGATATGCGTAT
CTCAATGTCTTAGCCACGTGATGGCGCGCTTCGCTAGTNCGCTGTACACGAACTCTGGCTCGGTACGCGTTCTCGTCTCAGCTGCAGGAGATCGATACGA
AGGTGATTGCGCCATCCACTGCTTGCTGTCTGTGCTGTGGTCTTACGCGTTCGATCTCTTGCTCTATGCTGCTGACCANCGCACTTACTCGACTCTTCTC
TAGACCCCTAACTTATACTCTGCGTATTCACGACTCGCCCCTACTCCTACCTCTCGCGCAGTCACGTAGCGATGACTCGCGCGCGCATCTGCTTGCGCGT
GTGCTGGGATAGCTTCGCTGATATGTTACGTAGCATGACTGCGTTGTCGTCGTGACCGCTGCTGATGCCACGTGCTTGAACATGGTTNTGAGTNATATGT
NGATAGCTTGTACGATATGGNANATGTGATAANTTTACGATGTTTATTTCGATTACACGATAGATCGCGCTACTATGTGCTAGTATAACGCAGTCTTCAA
CTATNGAATCTCTCGCGACACTATNANANCTATGAGTGCATACACTACAGTGCGTCGTGAACGACTGAGTTCATAGTCCATGAACATACGACAGAACTGG
CATACACGGC
>LE_HBa0141B13_T7_99529 (trimmed for quality and cloning vector)
CT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.6057
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0141B13
Clone
Clone name
hba-141b13
LE_HBa0141B13
C03HBa0141B13
P141B13
Clone type
BAC
Contamination
none
Estimated length
82,576
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found