SGN Marker TG77
SGN-M1
Synonyms |
Locus associations |
RFLP details |
Insert size
1800
|
Vector
pUC
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
TTCTTATTTCGCTGTTGGTTCTTGCTTTGCACAGAGGATCACGCAACATCCGAAATCAGAATAGTTTAGTACTTTAATTTTTTTACAAGG
TAAATAAGTTTCTTAATAATGGTAAAATATTAGCTGTATACCAAAAGGCTAAATTGGTTAGTGAAAACATGAATGGTCAAACGGGCTCTT TGTACAACAAGAACAACTAATTATGCTTGGTTATGAACTTCAATCGTGGTGCTTGTATGTCCTCGACTCCCCATCTACGTAAGCTTTAAG TAGACAGGTTTTAGTCAACTTGCACTAAATAGAGAGTTGGCTCAACTTGATAGTTCTGCAAATTACATGTGTCCACTATCATAGTTGACT GCTTAATTAACAGTTTTTTTGTTTCCAAGAATAAGTTTCGGCAATACTTGTAAAAATTTGTCTGTCAATCCTTCTTCTATTGTCTCCTAT ACTTTCTCTGGATTTCCACAATTTCTGATACTTGGAGTCGGAATGACTTACTATACTTCTATATCTCGACTCGACTATTGTGTTTCTGAC TTCTTCATTTTAATAGTTCTCGATTTCCTGATTACAGATCTCCCATCTGGCCTTTTCATTTGTTCTAAACTAGTATTATTGAACTTAAAT GGTCAAAGTGACATGCTTCTGCGCTG |
Reverse sequence
TGAAATGCATTGGGAGATTTGAAATGTTCCCCTATGGCACATCAAGGACAGCTCAAGTATCATTACATCTTACATTACAACTGAAGCACG
AATTAGCACACGTATGAGCAAACCCTAGAAGCAATGAAATTAACCTGCATTACCTTTTTAACGGCAAGGTCAAAATCGTCCAGGGTACCA TACTCTCTCTCGAAGCGAATCCATGAATTGCATATGTCCTGAATGATTCTGTTTTTTAGAAGAAGGGGTATCATCTAATTCAAAATAAAT AGCAACTTAGGCTGCAAAGAACAATCCAGTAAAAGATAAACATAACAGATAGATGTAAGGGATAGCACAAAAGCAGCCACATAAAGCACC AAGGAGAATCAAGAACTAATCACTCTTGACACTTGTTCATTTGTAAAGCATGTTTTCACAATAAATAGCAAAATTGATGGTACTTAATTA GTTGAGAGATATTTCTCCGGTACAAGGCGCAATGCCTATCCATTAGATTAGGCCAGCATGACAAAAACCATGCTTCAAAGCACAATTACA GACTTGTGTACCTCAAATACACAGTACTGAATATTAAAAGTTTGTTTTCATGGCCCC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U164099 | 1.6e-35 | 79 (13.2% of RFLP seq) | - |
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| ![]() Tomato QTL map |
| ![]() Pepper-AC99 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG77 was used as an overgo probe on plate 5 [well E9]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TCGCTGTTGGTTCTTGCTTTGCAC
|
B sequence
TGTTGCGTGATCCTCTGTGCAAAG
|
AB sequence
TCGCTGTTGGTTCTTGCTTTGCACAGAGGA
|
Marker sequence
TTCTTATTTCGCTGTTGGTTCTTGCTTTGCACAGAGGATCACGCAACATC
CGAAATCAGAATAGTTTAGTACTTTAATTTTTTTACAAGGTAAATAAGTT TCTTAATAATGGTAAAATATTAGCTGTATACCAAAAGGCTAAATTGGTTA GTGAAAACATGAATGGTCAAACGGGCTCTTTGTACAACAAGAACAACTAA TTATGCTTGGTTATGAACTTCAATCGTGGTGCTTGTATGTCCTCGACTCC CCATCTACGTAAGCTTTAAGTAGACAGGTTTTAGTCAACTTGCACTAAAT AGAGAGTTGGCTCAACTTGATAGTTCTGCAAATTACATGTGTCCACTATC ATAGTTGACTGCTTAATTAACAGTTTTTTTGTTTCCAAGAATAAGTTTCG GCAATACTTGTAAAAATTTGTCTGTCAATCCTTCTTCTATTGTCTCCTAT ACTTTCTCTGGATTTCCACAATTTCTGATACTTGGAGTCGGAATGACTTA CTATACTTCTATATCTCGACTCGACTATTGTGTTTCTGACTTCTTCATTT TAATAGTTCTCGATTTCCTGATTACAGATCTCCCATCTGGCCTTTTCATT TGTTCTAAACTAGTATTATTGAACTTAAATGGTCAAAGTGACATGCTTCT GCGCTG |
Marker Submitted By |
Name: Molly Jahn
Organization: Cornell University
Organization: Cornell University
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User comments |
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