SGN Marker TG540

SGN-M11

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1600
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG540 image not available
Forward sequence
TGTTGGAACTCTCCCTAAAGAGCAAGTAGCACAATAAGACATCAACTCGGAGAAAAAAGATATATGGCTGTTAATTTATCTTCCCTTTCC
TGCTTTGCTTCACTCGTAGTAAGTTTTTCACATTTTTGGATAACTCCACGGGAAATCAAAATGGAGAAGAAAAGGTAAAAGAGGCAAAAC
ATAATTTCGCTAGATTTGAGTTAATAAAATGATGGAATGTCCTATTGTAAGATGAACCATGCAGTTGTGACGACAGTCGGTTAACAGCAA
ACAAAATCATCGTATGAAAAGAGGCTCAATCATAACAGAAAGCAGGAGTTGTGGAGGGAGAGAAGACTGCAACCAACCTGTCCTTAGGAA
AGATTCTACTGCTACTGTAAATCTTGCACGGTTCAGGGTATGCAGCACAACAGATTTCACCTAAGACATACAAAAGCAATAAAACACCTT
CAGTCAAATGGGAAAAGAAAACGGGAAGGAATCAAAAGAGTTTGTTAAGAGATGCAGAACTATAAGTCAATGCACACTATTTAACCTCTC
GGT
Reverse sequence
CTAAAAATGGGTTGAGTTCGAGTCAAACCAATATTTAATTCAAGAATTGCGGAAATAAAGAAATCATTGAACCAGGGAGTTTCGTAGATG
TTAAGACTTAAGTATGGTCTTTACTATGAATTACTATTTGTTGGACTACTGGATTTCTTTTCTTTTTTTTTACACTAATTGTCGGGCTAC
TGTACTTCCATTCCATCTTATCGTTGGTGATTGAAGTATTTGGTTAAAGAACAGGAATCAAAATAGTGAAACATGTTATGATGTGTATAA
CTTTGTATAATAATATGGTAATATTTACAGTAATAATATCAGTGTTTTACTGTTATCTTTTTTATTATTAGAGAGATATTTCAAACTAAA
TTTTGATGACTTATGCTATTCTAATTATATTATACTTTAATGCAAAATAGCTAAATACCTAGATAGCCCCTTAAACTTGGCATGATTTGT
AAGTTAGAAACTCAAACTTAGCTCATGACTAGATAGACACCTCAACTCGTCTTATGTGTCTATTAAATATATCAATACTACATGGCAGAT
TGTGTTTTTTTTTGTAATATTAGACTTCTTTCTCAATCAATGTGTTCAATATAAATTCCAGCATC
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1709323.6e-3676 (14.0% of RFLP seq)+
SGN-U171094394 (65.1% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 7726)
Chromosome
10
Position
12.00 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG540 was used as an overgo probe on plate 14 [well B6]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

 Overgo Sequences

A sequence
AAGATGAACCATGCAGTTGTGACG
B sequence
GCTGTTAACCGACTGTCGTCACAA
AB sequence
AAGATGAACCATGCAGTTGTGACGACAGTC
Marker sequence
TGTTGGAACTCTCCCTAAAGAGCAAGTAGCACAATAAGACATCAACTCGG
AGAAAAAAGATATATGGCTGTTAATTTATCTTCCCTTTCCTGCTTTGCTT
CACTCGTAGTAAGTTTTTCACATTTTTGGATAACTCCACGGGAAATCAAA
ATGGAGAAGAAAAGGTAAAAGAGGCAAAACATAATTTCGCTAGATTTGAG
TTAATAAAATGATGGAATGTCCTATTGTAAGATGAACCATGCAGTTGTGA
CGACAGTCGGTTAACAGCAAACAAAATCATCGTATGAAAAGAGGCTCAAT
CATAACAGAAAGCAGGAGTTGTGGAGGGAGAGAAGACTGCAACCAACCTG
TCCTTAGGAAAGATTCTACTGCTACTGTAAATCTTGCACGGTTCAGGGTA
TGCAGCACAACAGATTTCACCTAAGACATACAAAAGCAATAAAACACCTT
CAGTCAAATGGGAAAAGAAAACGGGAAGGAATCAAAAGAGTTTGTTAAGA
GATGCAGAACTATAAGTCAATGCACACTATTTAACCTCTCGGT
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG540  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D11 marker 11
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