SGN Marker TG520
SGN-M119
Synonyms |
Locus associations |
RFLP details |
Insert size
1800
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG520 image not available
|
Forward sequence
AGGATCACAACAAGAATATTGCCCTGGAAAATAACAGCTGAGCAAACTGGAATTCCTAAGTAAAAGCAGACGCTATATGTGATTCATAGT
GAGACGAAATAACCAGTTCCTACTCCATCACAAAAAGAGACAGGTGGTATCATTTTCTATATCAACATGTATGGAGTTTTTTCAAGGCCT ATGTAAGATCGAGCATCATGCAAAATGCACACACCCAGAGTAATAGCAAATAACAGTGTAAATTCATAGAATCACACATTTTGGTATAAA ATCAGCATACCTACGGGTATAAAGGTGAAATCTGCAATCCTTTTCTCTATGGTCCTGACTACTTTATCTTGTCCCCTGGAAAGAAATGTT CCCGAACTTGTTCGAACCCTGCCAGGGAGGTTTATTAGTTAAAGCAGTGACAATCGAGATGAACAAGCACACGAATTGCTTACCTGCTAT CTGTACTCTTGCCAGT |
Reverse sequence
TCTTTATTTACTCAATGCACCCCAGGTTTGCTCGATTGAGATTACTATATTGACATGATATTCATTCATGGATATTGGATACTACTTCTA
TAAGGGTAATGTAATATTCTTTCGTGATGGTCAGGAAGACTGTCATGTGTAGGATTTGAGAAATTCTTGCATTTGATTTTTTTTACTACA CAAATTTGGGAAGGGCACATTACTTATGAATTTGGGTAAGATACAAATCAATATAGATAGCTCAACTGACGTAATGAAATGAAAAAAAAT CAAAATAACTTCATAACGATGGCAACACTTGATTCCTGCGTTCTTCTTTCTTTTAATCAGCATTGGTATCTCTATGCAATTTGCTTTTGC ACTGTGCCACTATGAGAAACCAAATACATTTCTCTGTCATTCAAGACCATGTGGATCACTTAAACTTGGTTTTCAGCAATCATCAATAAT ATTGAGGAAACTAGTGCCGATATTGATTCAA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U158351 | 3.3e-05 | 24 (5.2% of RFLP seq) | + |
SGN-U158351 | 1.3e-07 | 28 (6.0% of RFLP seq) | + |
SGN-U150816 | 3.4e-08 | 37 (7.9% of RFLP seq) | + |
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| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPIMP 2008 |
|
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG520 was used as an overgo probe on plate 4 [well F6]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
A sequence
TGTCCCCTGGAAAGAAATGTTCCC
|
B sequence
GGGTTCGAACAAGTTCGGGAACAT
|
AB sequence
TGTCCCCTGGAAAGAAATGTTCCCGAACTT
|
Marker sequence
AGGATCACAACAAGAATATTGCCCTGGAAAATAACAGCTGAGCAAACTGG
AATTCCTAAGTAAAAGCAGACGCTATATGTGATTCATAGTGAGACGAAAT AACCAGTTCCTACTCCATCACAAAAAGAGACAGGTGGTATCATTTTCTAT ATCAACATGTATGGAGTTTTTTCAAGGCCTATGTAAGATCGAGCATCATG CAAAATGCACACACCCAGAGTAATAGCAAATAACAGTGTAAATTCATAGA ATCACACATTTTGGTATAAAATCAGCATACCTACGGGTATAAAGGTGAAA TCTGCAATCCTTTTCTCTATGGTCCTGACTACTTTATCTTGTCCCCTGGA AAGAAATGTTCCCGAACTTGTTCGAACCCTGCCAGGGAGGTTTATTAGTT AAAGCAGTGACAATCGAGATGAACAAGCACACGAATTGCTTACCTGCTAT CTGTACTCTTGCCAGT |
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