SGN Marker CT287
SGN-M124
Synonyms |
Locus associations |
RFLP details |
Insert size
0
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT287 image not available
|
Forward sequence
not available
|
Reverse sequence
TTTTTCTACGATGAAAATCGTAACCCTTACCGTGTGAAAGTCCGTGACTGTTTGGACAGTAAAAAAATGGGATTCGATTACGCGCCAATG
CCCACTCCATGGCGTAATTTTAAACCAATCAGAAAGTCATCATCAGGAAAAGTGAATACAGCGTCAATTGCACCAGTTAGCAAGGTGTTC CCATTGGCGAAGCTGGACCGTGCGATTTCGTTCTCTATCACGCGGCCAGCCTCGTCAAGGACAACACAAGAGAAAAATGAGCAAGAGGAG ATACTGACATTCAATAAAATATCGTATGATGATAGGAACTATGTAAGGTTCGATGTGTTTCTGAACGTGGACAAGACTGTGAATGCAGAT GAGCTTGATAAGGCGGAGTTTGCAGGGAGTTATACTAGCTTGCCGCATGTTCATGGAAGTAATACTAATCATGTTACCAGT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U143361 | 3.1e-05 | 40 (9.1% of RFLP seq) | - |
SGN-U143361 | 5e-07 | 55 (12.5% of RFLP seq) | - |
SGN-U143363 | 1.3e-10 | 94 (21.3% of RFLP seq) | - |
SGN-U143363 | 2.5e-24 | 168 (38.1% of RFLP seq) | - |
SGN-U143361 | 2.6e-27 | 101 (22.9% of RFLP seq) | - |
SGN-U160484 | 7.9e-43 | 124 (28.1% of RFLP seq) | - |
SGN-U160484 | 3.3e-48 | 132 (29.9% of RFLP seq) | - |
SGN-U160485 | 1e-155 | 405 (91.8% of RFLP seq) | - |
SGN-U143365 | 436 (98.9% of RFLP seq) | - | |
SGN-U143362 | 441 (100.0% of RFLP seq) | - |
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| ![]() Tomato QTL map |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT287 was used as an overgo probe on plate 16 [well E10]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GTAACCCTTACCGTGTGAAAGTCC
|
B sequence
CTGTCCAAACAGTCACGGACTTTC
|
AB sequence
GTAACCCTTACCGTGTGAAAGTCCGTGACT
|
Marker sequence
TTTTTCTACGATGAAAATCGTAACCCTTACCGTGTGAAAGTCCGTGACTG
TTTGGACAGTAAAAAAATGGGATTCGATTACGCGCCAATGCCCACTCCAT GGCGTAATTTTAAACCAATCAGAAAGTCATCATCAGGAAAAGTGAATACA GCGTCAATTGCACCAGTTAGCAAGGTGTTCCCATTGGCGAAGCTGGACCG TGCGATTTCGTTCTCTATCACGCGGCCAGCCTCGTCAAGGACAACACAAG AGAAAAATGAGCAAGAGGAGATACTGACATTCAATAAAATATCGTATGAT GATAGGAACTATGTAAGGTTCGATGTGTTTCTGAACGTGGACAAGACTGT GAATGCAGATGAGCTTGATAAGGCGGAGTTTGCAGGGAGTTATACTAGCT TGCCGCATGTTCATGGAAGTAATACTAATCATGTTACCAGT |
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