SGN Marker T0337
SGN-M1414
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 1.07.01
Tomato EST read: TPSAL05TH
Arabidopsis best BAC match: AL031018.1
Arabidopsis position: 4.1180000
Arabidopsis identities: 0.921
Best GenBank protein hit: AAB71230.1
Evalue: 1.3e-77
Identities: 0.985
Description: gamma-glutamylcysteine synthetase [Lycopersicon esculentum]
Comment: involved in glutathione biosynthesis
More information about COS markers can be found on the COS markers page.
Tomato EST read: TPSAL05TH
Arabidopsis best BAC match: AL031018.1
Arabidopsis position: 4.1180000
Arabidopsis identities: 0.921
Best GenBank protein hit: AAB71230.1
Evalue: 1.3e-77
Identities: 0.985
Description: gamma-glutamylcysteine synthetase [Lycopersicon esculentum]
Comment: involved in glutathione biosynthesis
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T0337 was used as an overgo probe on plate 12 [well F8]
Plausible BAC Matches: P082G11, P123M01, P041I09, P089A22, P191C11, P089C22, P184K06, P316E01, P315A05, P248B22, P106G10, P218D16, P024A19, P234H01, P251H04, P225C16, P317B20, P147D05, P081D03, P009B23, P167D14, P089B22, P296A01, P335I22, P312I09, P238O12, P093F09, P090A22, P194B16, P089A23, P257J22, P072G08
Overgo Sequences
A sequence
TAGAACCTGGTGGTCAGTTTGAGC
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B sequence
AGTGGTGCACCACTAAGCTCAAAC
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AB sequence
TAGAACCTGGTGGTCAGTTTGAGCTTAGTG
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Marker sequence
AACTTGATGAGCAGGATAGGCACTGAACATGAAAAGTTTGGTTTCGAGTT
TGGAACCCTGCGACCCATGAAGTATGATCAAATAGCTGACTTGCTAAATG GTATTGCTGAGCGGTTTGATTGGGAAAAAGTAATGGAGGGTGACAAGATT ATTGGCCTGAAACAGGGAAAGCAAAGCATATCATTAGAACCTGGTGGTCA GTTTGAGCTTAGTGGTGCACCACTTGAAACACTGCATCAAACTTGTGCAG AGGTTAATTCACATCTTTACCAGGTTAAAGCTGTTGCAGAAGAGATGGGA ATTGGATTCTTAGGAACTGGATTCCAGCCAAAGTGGGGGCTGAAAGATAT ACCAATAATGCCGAAGGGGAGATATGAGATTATGAGAAATTACATGCCTA AAGTTGGCTTACTTGGGCTGGATATGATGTTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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