SGN Marker T0513
SGN-M1451
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 98
Tomato EST read: TCABD91TH
Arabidopsis best BAC match: AC002505.2
Arabidopsis position: 2.1490000
Arabidopsis identities: 0.717
Best GenBank protein hit: AAF98368.1
Evalue: 2.4e-46
Identities: 0.908
Description: patatin-like protein 1 [Nicotiana tabacum]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TCABD91TH
Arabidopsis best BAC match: AC002505.2
Arabidopsis position: 2.1490000
Arabidopsis identities: 0.717
Best GenBank protein hit: AAF98368.1
Evalue: 2.4e-46
Identities: 0.908
Description: patatin-like protein 1 [Nicotiana tabacum]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T0513 was used as an overgo probe on plate 6 [well H2]
Plausible BAC Matches: P233E24, P027N01
Overgo Sequences
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A sequence
TGATGGAGGTGGCATTCGAGGAAT
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B sequence
GATGGTAGCTGGAATAATTCCTCG
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AB sequence
TGATGGAGGTGGCATTCGAGGAATTATTCC
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Marker sequence
TAATTATTCATTTAGAATAAAGTTTTCTTATACCTTCTTTTGATTATCTA
TTAATCATTACAAATGGAGAGAAAAACATCTCAAATCCAACCACCAACTT ATGGAGATTTCATCACTATTCTTAGTATTGATGGAGGTGGCATTCGAGGA ATTATTCCAGCTACCATCCTCACTTTTCTTGAATCACAACTTCAGGAGTT GGATGGAAAAAATGCAAGAATTGCAGATTACTTTGATGTTATTGCCGGAA CTAGCACCGGTGGCCCTGTTACGGCCATGTTAACGGCTCCAGATGAAAAT CATCGTCCACTTTATGCTGCTAAGGATATTACACCGTTCTATTTAGAGCA TTGTCC |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T0513
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| User comments |
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