SGN Marker T0585
SGN-M1485
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TMEAA46THB
Arabidopsis best BAC match: AC006416.2
Arabidopsis position: 1.0250000
Arabidopsis identities: 0.886
Best GenBank protein hit: AAD18098.1
Evalue: 6.1e-99
Identities: 0.810
Description: g5bf [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEAA46THB
Arabidopsis best BAC match: AC006416.2
Arabidopsis position: 1.0250000
Arabidopsis identities: 0.886
Best GenBank protein hit: AAD18098.1
Evalue: 6.1e-99
Identities: 0.810
Description: g5bf [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
![]() |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T0585 was used as an overgo probe on plate 4 [well H7]
Plausible BAC Matches: P117B06, P132L21, P246I01, P197E12, P191H06, P300G03
Non-Plausible BAC matches
Overgo Sequences
A sequence
TCAACCCAAACAGCCTTCTTTCTC
|
B sequence
GGAAGAAGGAAGGAGAGAGAAAGA
|
AB sequence
TCAACCCAAACAGCCTTCTTTCTCTCTCCT
|
Marker sequence
GGCACCAAATCAACAACAACATGGCTAGTTTGGTTGCTATTCAACCCAAA
CAGCCTTCTTTCTCTCTCCTTCCTTCTTCCAATTCTGACTTCAATGGTGC CAGATTGATCTCCTCATTTCAGTATAAGAGGAAACCATGCTTGTCAAAAG GAGCATTGCAAGTTACAGCCTCGAGTGAAAAGAAAATCCTGATAATGGGA GGCACGCGATTCATTGGTGTGTTCCTATCGAGACTTCTTGTGAAAGAAGG CCACCAGGTTACTCTATTCACAAGAGGAAAAGCTCCAATCTCTCAACAAT TGCCAGGTGAATCGGACCAGGATTATGCTGATTTCTCCTCCAAGTTATTG CACTTGAAGGGTGACAGAATGGATTTCGATTTTGTGAAGAGCAGTCTTTC TGCAGAGGGCTATGATGTTGTGTATGACATAAATGGACGTGAAGCAACTG AAGTGGAGCCAATATTGGATGCATTACCTAATCTAGAACAGTACATCTAC TGCTCTTCAGCTGGTGTATACCTTAAAACTGATTATTTACCACATTTTGA GGTTGATGCAGGTGACCCGAAGAGTAGGCATAAAGGAAAGCTTGAGACAG AAAGCTTGTTAGTATCACGAGATGTTAATTGGACTTCTCTAAGGCCTGTT TATATTTATGGGCCACTTAACTACAATCCTGTTGAAA |
![]() |
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
![]() |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)