SGN Marker TG48
SGN-M15
Synonyms |
Locus associations |
RFLP details |
Insert size
1500
|
Vector
pUC
|
Cutting Site
EcoR1/BamH1
|
Drug Resistance
AMP
|
Image |
Forward sequence
TAAACATTTTTATGGGGTATATGATTCCTCTCCATCCCCTTTTCTGTTCATTTTACTTGAGAGCTAGATAGCTACAACAGTCTTCACCAG
GCTAGTACAAAATCATCACCACCATCAAACGATTTTTTCCTCTCAATCAAAGGGCTTAATATCATACTTAATAAGCCAGATTTCACTACC CCCAAAAGAGAAGAAGTCAGAAGTTCTAAAAGTTTAAAACAATTATGGAACCTAACCATGAAATATGCATGTATAAAGATAATAAATCTT ATATTTATTATTTTGCTATAAACAACATGTATTAGTGTAATTGGATGAACCAACTTGCCTGATCTAGGGCAAAATCAAACATGTAGCGCA AATGATGTTGCACGATGTTCTTGCCGGTGGCAGATTGGTAGGCTAAATCGAATGCCTGAGCTGCTGAATACACAAATCCAATGACATTCA CTGACATACAGTACCTGCAACGTTATTCACCTACCAATATTATCATTCATAACTATACCTGCCTAACACATTTATTCATTGCTCTGAAAG AGTGAAACTTAATGCGCTGCAGAATTAATTCAGTCAATGTAAAGAGAACAAGTGACAA |
Reverse sequence
TTATATTTAATAACAATTTAATTTTTAAAATATTTATTTACTTAAAACCACAAAAACGTTATAATTTATTTAAATTTTTAGATCACAGTT
TTCATTTTTTTTGGAATACTGTACTCGTATTTAGTAGTAGTCCTAAATATAGAGCTTTCACAAATTCAGACGTGGAAGACGAAAGTGGAA ACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCA ATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAAC AGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCG GCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTC AGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U153699 | 431 (71.7% of RFLP seq) | - |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
| ![]() Pepper-AC99 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
TG48 was used as an overgo probe on plate 6 [well B6]
Plausible BAC Matches: P016A12, P018N23, P269E04, P060A20, P309B06, P189P05, P265F24, P140C03, P214L23, P280C08, P236E02
Overgo Sequences
A sequence
GAGAGCTAGATAGCTACAACAGTC
|
B sequence
GTACTAGCCTGGTGAAGACTGTTG
|
AB sequence
GAGAGCTAGATAGCTACAACAGTCTTCACC
|
Marker sequence
TAAACATTTTTATGGGGTATATGATTCCTCTCCATCCCCTTTTCTGTTCA
TTTTACTTGAGAGCTAGATAGCTACAACAGTCTTCACCAGGCTAGTACAA AATCATCACCACCATCAAACGATTTTTTCCTCTCAATCAAAGGGCTTAAT ATCATACTTAATAAGCCAGATTTCACTACCCCCAAAAGAGAAGAAGTCAG AAGTTCTAAAAGTTTAAAACAATTATGGAACCTAACCATGAAATATGCAT GTATAAAGATAATAAATCTTATATTTATTATTTTGCTATAAACAACATGT ATTAGTGTAATTGGATGAACCAACTTGCCTGATCTAGGGCAAAATCAAAC ATGTAGCGCAAATGATGTTGCACGATGTTCTTGCCGGTGGCAGATTGGTA GGCTAAATCGAATGCCTGAGCTGCTGAATACACAAATCCAATGACATTCA CTGACATACAGTACCTGCAACGTTATTCACCTACCAATATTATCATTCAT AACTATACCTGCCTAACACATTTATTCATTGCTCTGAAAGAGTGAAACTT AATGCGCTGCAGAATTAATTCAGTCAATGTAAAGAGAACAAGTGACAA |
Marker Submitted By |
Name: Molly Jahn
Organization: Cornell University
Organization: Cornell University
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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