SGN Marker T0628
SGN-M1507
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 1.05
Tomato EST read: TMEAH15TH
Arabidopsis best BAC match: AC009325.6
Arabidopsis position: 3.0030000
Arabidopsis identities: 0.888
Best GenBank protein hit: AAA34065.1
Evalue: 3.1e-59
Identities: 0.903
Description: chloroplast carbonic anhydrase [Nicotiana tabacum]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEAH15TH
Arabidopsis best BAC match: AC009325.6
Arabidopsis position: 3.0030000
Arabidopsis identities: 0.888
Best GenBank protein hit: AAA34065.1
Evalue: 3.1e-59
Identities: 0.903
Description: chloroplast carbonic anhydrase [Nicotiana tabacum]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato - Kazusa and SolCAP markers mapped to genome |
|  Kazusa F2-2000 genetic map |
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T0628 was used as an overgo probe on plate 11 [well G9]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
GCACATCAATGCACAGCTTGTGAG
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B sequence
CGTTCACAGCTTCCTTCTCACAAG
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AB sequence
GCACATCAATGCACAGCTTGTGAGAAGGAA
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Marker sequence
GTACTCTGGAGTAGGAGCAGCCATTGAATACGCCGTTCTTCATCTTAAGG
TGGAGAACATCGTTGTCATTGGCCACAGTGCTTGTGGAGGTATCAAAGGT CTCATGTCACTACCTGAAGATGGTAGTGAATCAACTGCCTTTATTGAGGA TTGGGTAAAAATTTGTTTACCTGCCAAGGCAAAGGTTCTGGCCGATCACG GAGGGAAAGAATTTGCACATCAATGCACAGCTTGTGAGAAGGAAGCTGTG AACGTTTCACTTGGAAATCTGCTTACGTATCCATTCGTGAGAGAAGGATT GGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCTTGAAGG GTGGATTTGAGCTGTGGGGACTTGA |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T0628
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| User comments |
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