SGN Marker T0721
SGN-M1563
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 2.30.03
Tomato EST read: TMEDA63TH
Arabidopsis best BAC match: AB008266.1
Arabidopsis position: 5.2810000
Arabidopsis identities: 0.952
Best GenBank protein hit: AAA93075.1
Evalue: 1.6e-51
Identities: 0.660
Description: PSI-N [Arabidopsis thaliana]
Comment: photosystem I reaction centre subunit psaN precursor
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEDA63TH
Arabidopsis best BAC match: AB008266.1
Arabidopsis position: 5.2810000
Arabidopsis identities: 0.952
Best GenBank protein hit: AAA93075.1
Evalue: 1.6e-51
Identities: 0.660
Description: PSI-N [Arabidopsis thaliana]
Comment: photosystem I reaction centre subunit psaN precursor
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T0721 was used as an overgo probe on plate 12 [well C8]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CAAGAAGAGGTTGGCTACAAGTGG
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B sequence
CCTTGCGAAATTCGCACCACTTGT
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AB sequence
CAAGAAGAGGTTGGCTACAAGTGGTGCGAA
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Marker sequence
GGAAAAGAAGAAATGGCAGCAATGAACTCAAGTGTATTGGCTTGCAGCTA
TGCTATATCAGGCATGAGTTCATCTGAACTCACATCAAAACATACTGTTA CTACTATGTCTTCCCCTTCACTTCAAAAATTGCCACTCATCATTAAGGCT CAACAACAATCCAGTTCCAACATATCTGCTGGAAGAAGAGTTGCTCTGCT TGGCCTTGCTGCTGCACTTTTCACATCTGCCTCTTCTGCTAATGCTGGTG TTATCGACGAATATCTTGAGAAAAGCCAAGCCAACAAGGAATTGAATGAC AAGAAGAGGTTGGCTACAAGTGGTGCGAATTTCGCAAGGGCGTATACTGT TCAGTTTGGAACCTGCAAGTTCCCTGAGAACTTTACAGGATGCCAAGACC TTGCAAAACAAAAGAAAGTGCCATTTATAAGTGACGATTTGGCGTTGGAG TGTGAAGGCAAGGACAAATACAAGTGTGGTTCAAATGTGTTCTGGAAATG GTGAAGCTTAGCTTGAAGAAATGTATTAATCGTTTCCCAAAATGTATCTA TTGTGACAATGAGAAGTAATTTACCATCCATTTTC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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