SGN Marker T0725
SGN-M1567
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TMEDB70TH
Arabidopsis best BAC match: AC007168.4
Arabidopsis position: 2.1270000
Arabidopsis identities: 0.846
Best GenBank protein hit: AAF07780.1
Evalue: 1.7e-13
Identities: 0.566
Description: unknown protein; 15069-22101 [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEDB70TH
Arabidopsis best BAC match: AC007168.4
Arabidopsis position: 2.1270000
Arabidopsis identities: 0.846
Best GenBank protein hit: AAF07780.1
Evalue: 1.7e-13
Identities: 0.566
Description: unknown protein; 15069-22101 [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Eggplant-LXM 2002 |
Overgo hybridization and physical mapping |
T0725 was used as an overgo probe on plate 8 [well A4]
Plausible BAC Matches: P214E16
Overgo Sequences
A sequence
GAAGAGTTCATTCGGGAAGGTCAC
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B sequence
TCGGTCAATCTGGATCGTGACCTT
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AB sequence
GAAGAGTTCATTCGGGAAGGTCACGATCCA
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Marker sequence
CGCCAAACGAAGGTTGTTTCAACTGGTCCTAATCCAGAGTTCGATGAGAG
CTTTTCATGGTCCTTTGAAAGTCCTCCTAAAGGCCAGAAGCTCCATATTT CATGCAAGAATAAGAGCAAAATGGGGAAGAGTTCATTCGGGAAGGTCACG ATCCAGATTGACCGAGTAGTTATGCTGGGTGCAGTAGCTGGGGAGTACAC CTTGTTGCCCGAGAGCAAAAGCGGACCCTCAAGGAATTTAGAAATAGAAT TCCAATGGTCCAATAAGCAGCAAATGGAATAAGGTTTACTCAAACTGCAT TTTAGTGGTATAGGAACAAATGTTTGGAACTTCTTTCGGTTTTCTGTTTC CTTTCTTCCTGTTTAATTATAAGGTGAATGTATATAGTGTCTGGTATAGG TGTTACTACGTTTCGATCATATTTAGTTGTTGTAACGGCTGTTGTCAATG TATTCTTTTGTAACTTGAGTCACTTTAGTATCATCAAGGAAGGGACATGG ATTCATGGTTTGCTTCCTTTTT |
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