SGN Marker T0953
SGN-M1678
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TMEAV18TH
Arabidopsis best BAC match: AB017069.1
Arabidopsis position: 5.0930000
Arabidopsis identities: 0.822
Best GenBank protein hit: BAA83585.1
Evalue: 2.0e-91
Identities: 0.807
Description: Similar to Caenorhabditis elegans cosmid D1054; hypothetical protein (Z74030) [Oryza sativa]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEAV18TH
Arabidopsis best BAC match: AB017069.1
Arabidopsis position: 5.0930000
Arabidopsis identities: 0.822
Best GenBank protein hit: BAA83585.1
Evalue: 2.0e-91
Identities: 0.807
Description: Similar to Caenorhabditis elegans cosmid D1054; hypothetical protein (Z74030) [Oryza sativa]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T0953 was used as an overgo probe on plate 9 [well C4]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CAAGTTGACCATGTGGAACCATGG
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B sequence
GACAGTTGCCAGTCATCCATGGTT
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AB sequence
CAAGTTGACCATGTGGAACCATGGATGACT
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Marker sequence
TCATGAAGTGATTGATGAAATCTATAATCAAGTTGACCATGTGGAACCAT
GGATGACTGGCAACTGTCGTGGTCCTTCAACAGCCTTCTGCCTTCTCTAC AAGTTCTTCACAATGAAACTTACTGTCAAGCAAATGCATGGCCTGTTAAA GCATCCAGATTCTCCTTACATTAGAGCTATTGGGTTCCTTTATCTGAGAT ATCTTGGTGATTTTAAGACATTATGGGGTTGGTATGAGCCTTACCTCAAA GATGATGAGGAATTCTCTCCTGGATCCAGTGGGCAAATGACCACAATGGG TGTATATGTGCGTGACTTATTTCTCGGGCAGTATTATTTTGACACACTAC TACCCCGCATTCCTGTTCCTGTCGTGCGGACAGCAGTTGCCAGTCTCGAA AAAATGAATCTGCCGACCAAACTTTCTGGGTCGATTGGCGATTCTAGTCG TGGATCTGAGGAAACTTCTCGCCGGCCACCTTCTGTCAAAGCTTCCCTTT CAGTGTCCTTTGGTCAGCGGGCACCTCATCGTGCATCAACTAGAGATTCA TCTCCCATCCGAAGAACAATNGCACCACCATCCTATGATAA |
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User comments |
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