SGN Marker T0991
SGN-M1697
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 10.01.99
Tomato EST read: TMGAE86TH
Arabidopsis best BAC match: AF128396.1
Arabidopsis position: 4.0560000
Arabidopsis identities: 0.823
Best GenBank protein hit: AAF72555.1
Evalue: 1.8e-53
Identities: 0.833
Description: cryptochrome 1 [Lycopersicon esculentum]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMGAE86TH
Arabidopsis best BAC match: AF128396.1
Arabidopsis position: 4.0560000
Arabidopsis identities: 0.823
Best GenBank protein hit: AAF72555.1
Evalue: 1.8e-53
Identities: 0.833
Description: cryptochrome 1 [Lycopersicon esculentum]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T0991 was used as an overgo probe on plate 4 [well D7]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
TTAGGAGGGATCTGAGGCTTGAAG
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B sequence
GCCAGTGCTGGATTATCTTCAAGC
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AB sequence
TTAGGAGGGATCTGAGGCTTGAAGATAATC
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Marker sequence
GTTAAAGATAGGTGACACATTGTTGGTAATATTTTGAGGCAAAAAAAAAT
AAAATGTCAAGTGGTGGTTGTAGTATAGTATGGTTTAGGAGGGATCTGAG GCTTGAAGATAATCCAGCACTGGCTGCTGCAGTGAGAGCAGGATCAGTGA TTGCTGTGTTTATATGGGCACCAGAAGAAGAAGGATACTATTGCCCTGGA AGAGTGTCAAGATGGTGGATTAAGAAAAGTTTGGCTCATCTTGATTCATC TTTGAAGAAACTTGGCACTTCACTCATTACAAAGAGATCTAATGATAGTG TTTCTTCTCTTCTTCAAGTTGTCAAATCTACCGGTGCAACTCGAGTTTTT TTCAATCATTTATATGATCCAATATCACTTGTAAGGGATAATTGCGCAAA GGAAACCTTATCAACTG |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T0991
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| User comments |
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