SGN Marker T1062
SGN-M1733
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TFBAA80THB
Arabidopsis best BAC match: AC008113.4
Arabidopsis position: 1.1330000
Arabidopsis identities: 0.816
Best GenBank protein hit: BAB00011.1
Evalue: 1.4e-53
Identities: 0.793
Description: similar to unknown protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TFBAA80THB
Arabidopsis best BAC match: AC008113.4
Arabidopsis position: 1.1330000
Arabidopsis identities: 0.816
Best GenBank protein hit: BAB00011.1
Evalue: 1.4e-53
Identities: 0.793
Description: similar to unknown protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1062 was used as an overgo probe on plate 15 [well C11]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
GCATCCTGTTGCCAATGTTAGACC
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B sequence
AAGCGAATCTCGCAGAGGTCTAAC
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AB sequence
GCATCCTGTTGCCAATGTTAGACCTCTGCG
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Marker sequence
CGACGCCTTCGCCGTCCACAAAACCTAATCACAGGCAACCGGAAAAATAA
ATCACAGAATACTCCTATCGACGACGACTACGCCGGTGGACGGCGGCGGC GGAGAAGTACCTTCATCGTATAGATCCACCAATCAAAGCCTCATCGGCGC CAATTGGAAGAAAACTAGTCTAGATTCTATAAGTTTCCGGTAGATTATCA AATCTCCGTCCGTTTGGTTTTCTATATCTCAATTATCTTACCAGATGAAC GAAGTGCTTACAGCTTCCGATGCATCTTCAAGTGCGCGGTCGTATTCGTC GTCGATTGCACCTGTCAATGTTCCCCTCTTTTCGGCATTACTTGCCTGTG CTATTGCACAATTTCTCAAGCTATTCACCACCTGGTACAAGGAGAAGAGA TGGGATTCAAAAAGGATGCTTAGCTCAGGTGGAATGCCATCATCACATTC AGCAACAGTTACTTCACTGATAATGGCAATTTATTTACAGGAAGGAGCTG GAGGATCTGTCTTCGCGATTGCTGTGGTTTTGGCATGTGTTGTAATGTAT GATGCTACTGGTGTTAGGCTTCATGCTGGGCGCCAGGCTGAATTGTTGAA CCAGATAGTGTGTGAATTGCCTCCCGAGCATCCTGTTGCCAATGTTAGAC CTCTGCGAGATTCGCTTGGTCACACTCCCCTTCAGGTTCTTGCCGGTGCA GTGCTGGGATGTGTAGTGCCATTACTGCTGAGAAGCTCAATCTAGAGTTC AACTNTATGATCTCCCTTCAAATACTCAGTAAATATCCGAATGGTTCTAA GCTATTAAAGCTGGAATCAACATC |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1062
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| User comments |
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