SGN Marker T1076
SGN-M1745
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TFBAN87TH
Arabidopsis best BAC match: AC009755.5
Arabidopsis position: 3.0040000
Arabidopsis identities: 0.753
Best GenBank protein hit: AAF02126.1
Evalue: 3.1e-44
Identities: 0.754
Description: unknown protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TFBAN87TH
Arabidopsis best BAC match: AC009755.5
Arabidopsis position: 3.0040000
Arabidopsis identities: 0.753
Best GenBank protein hit: AAF02126.1
Evalue: 3.1e-44
Identities: 0.754
Description: unknown protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1076 was used as an overgo probe on plate 11 [well F4]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
GGATCCCAAAACACCTTTCTCCAC
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B sequence
GGGCATCCAAATAGCTGTGGAGAA
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AB sequence
GGATCCCAAAACACCTTTCTCCACAGCTAT
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Marker sequence
GGGCAGTCCTGTCCTCCCTCCATCCTATTTCTTTGGAGCTCAAACTGCAA
CCTTAGATTCTTCAAATTTTCCGGATAAAATTACTTCCATTGGTTCTCGA TTTCATCTGAGAAATAAAATGGATATTGATGAAATACTTGGGGTATCTCG GCCTGTGAGTTTGACAAACAAGAGTGCTATTTATGTTTGGGGTTACAATC AATCTGGGCCAACGGGTCGGAGAGGGAAAGAGAGGAGTTTGAGGATCCCA AAACACCTTTCTCCACAGCTATTTGGATGCCCAGCTCGTGGGAATTCCCG TTGGTTGGATATTGCTTGTGGTCGTGAGCATACTGCTGCTGTGGCTTCTG ATGGATCGCTTTTTACATGGGGAGCTAACCAATTTGGTCAACTGGGTGAC GGAACTGAAAATGCTAGGAAGCACCCCTAGAAAGTGAAACAATTGCCATC TGAATTTGGGATTA |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1076
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| User comments |
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