SGN Marker T1098
SGN-M1762
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TFBAU38THC
Arabidopsis best BAC match: AC002333.2
Arabidopsis position: 2.2370000
Arabidopsis identities: 0.703
Best GenBank protein hit: AAB64028.1
Evalue: 4.9e-18
Identities: 0.767
Description: hypothetical protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TFBAU38THC
Arabidopsis best BAC match: AC002333.2
Arabidopsis position: 2.2370000
Arabidopsis identities: 0.703
Best GenBank protein hit: AAB64028.1
Evalue: 4.9e-18
Identities: 0.767
Description: hypothetical protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1098 was used as an overgo probe on plate 4 [well D9]
Plausible BAC Matches: P113M01, P180O15, P217N24
Overgo Sequences
A sequence
GGTTAGTTCCTTCTGAGAAGATGG
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B sequence
TATCCTGGAAGTCCAGCCATCTTC
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AB sequence
GGTTAGTTCCTTCTGAGAAGATGGCTGGAC
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Marker sequence
GCAGAATACAAAAGTCTTAGGTTAGTTCCTTCTGAGAAGATGGCTGGACT
TCCAGGATACAGCGCCCTTGCTCCCAAGACTAAGAATCTGGTTATGGCTG GAGGTTTGACAGGATTTGTTTTTGGTGTGTACTACTACACTATGAGAGCT GTTGGAGGCTCAGATGAACTTCAAGTAGCCATTGATAAGTTTGAAGATGC AAAACGCAGCAGTGACGCTGAAGCAAGTTTGGCACCCAAGCAATAATTGT GTCCAATATGAAGGTGACACTGCAATTTGGAAAGAAGTACTGGATGATTT TGAAGGAGTAGAACCAGACTGAATAACTAAAACTGTTTCTCATGCTTTGC GAATACACACACTTAGCTGTAAAGATATCAAGATATTGCATCCTTTTTTA AGCTTTTATGTTGAGATAAATTTTCTTCTTTTTTGAATTTCAATGTCTAC AGACTATACAGTCATCCTGTTTATTTTAGGTTTTACAGACTCTTCATTTA GTATTCCTGTTGAGTTTGATCATCGGGCTGATAATGAGAGAATATAAAAT CTGGTACAAGTATAAAGTGACGAAC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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