SGN Marker T1110
SGN-M1769
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TFBBA21TH
Arabidopsis best BAC match: Z97341.2
Arabidopsis position: 4.0900000
Arabidopsis identities: 0.657
Best GenBank protein hit: CAB46039.1
Evalue: 4.1e-38
Identities: 0.612
Description: HSP like protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TFBBA21TH
Arabidopsis best BAC match: Z97341.2
Arabidopsis position: 4.0900000
Arabidopsis identities: 0.657
Best GenBank protein hit: CAB46039.1
Evalue: 4.1e-38
Identities: 0.612
Description: HSP like protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1110 was used as an overgo probe on plate 10 [well A1]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
AAGAACTTGCTGCACGCCCTGCTT
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B sequence
CGAGCATGATCAGATGAAGCAGGG
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AB sequence
AAGAACTTGCTGCACGCCCTGCTTCATCTG
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Marker sequence
GATGAATAAAGAAGAAGAACAGCTGAATTGAAGAATAGCTTGGAAGGATA
CATATATGATACGAGAGACAAGCTTGAATCTGGAGATTTTGTGACAATAT CAACCAGTCAAGAGCGCCAGTCCTTTATTCAGAAACTTGATGAGGTACAA GAATGGTTGTACACAGATGGTGAAGATGCTTTTGCCAAGCAGTTTCAAGA ACATTTAGATAAGTTGAAAGCTATTGGGGATCCCATATTTTTCAGACATA AAGAACTTGCTGCACGCCCTGCTTCATCTGATCATGCTCGCAAATACCTT AATGAAGTGCAACAGATTGTGCGTGGATGGGAAACCAACAAATCGTGG |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1110
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| User comments |
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