SGN Marker T1151
SGN-M1797
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TFBBH34TH
Arabidopsis best BAC match: AC007138.1
Arabidopsis position: 4.0120000
Arabidopsis identities: 0.575
Best GenBank protein hit: AAD22649.1
Evalue: 1.2e-37
Identities: 0.497
Description: predicted protein of unknown function [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TFBBH34TH
Arabidopsis best BAC match: AC007138.1
Arabidopsis position: 4.0120000
Arabidopsis identities: 0.575
Best GenBank protein hit: AAD22649.1
Evalue: 1.2e-37
Identities: 0.497
Description: predicted protein of unknown function [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
![]() |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1151 was used as an overgo probe on plate 2 [well F3]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TGTATTCGTCTCGGAGAGATCAGG
|
B sequence
GTAAATGCGAGGAGCACCTGATCT
|
AB sequence
TGTATTCGTCTCGGAGAGATCAGGTGCTCC
|
Marker sequence
GCCAAAACGTCATGCCTAACATGAAGAGTCCCCACCTACTTACGATCCGT
CGCCGTTTCCTACTGCAGCTCAGATTTCTCTATCATAACATTTGCCATTT CCAGCCTGCAAAGCACATCAACCATAGTATCATGGATTCACAGTCGTCAC CACATGGCTCTATTATCTTCTCCACCGTCGGCAGAACCAATTATGGCTTC GACATCTTCTCCATCAAATCTCCATTTTCTTTTCTCAATTCTCCGGTAGA ACATCGCCTCACAGACGGTACCTCCATCAATTACAACGGACAGTTTGTCG ATGAAGATCAAACACTTGTATTCGTCTCGGAGAGATCAGGTGCTCCTCGC ATTTACTTGAGACACCCCTCCTCTCAGGTACAGATGGAACAACTTCCTAC TCCCATTGATAGCCTATTTCTCGACCGTCCATTTCTTCGAAATAAACAAC TCTACTATATTTCAGCTCATCAGCAACCCAAAAAAGTTTTCACCAGCTCG TCCGCTCTTTACTCTACCAATATAGAAGATAATAGTAACATCATCCGCTT GACTCCGTACGGCTGCGTTGATTATAGTCCGGCGATTTCGCAGTCTGGAC ACCTGATTGCGGTTGCATCTTACGGAGACCGTCGTTGGCCTACTGGTGAA TTCCATGA |
![]() |
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
![]() |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)