SGN Marker CT234
SGN-M186
Synonyms |
Locus associations |
RFLP details |
Insert size
800
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT234 image not available
|
Forward sequence
ATACCACTACATAGAAGTAAGTCTCAAAGTTACAATAATAGCCACAAAGATGCTAATCTTCTAGCAAATGATGATTTTATTGAAGATGAG
CCTGTTCCCTTATCTCAAGTCAAGATAGGACAAGAATATGAAATTGTCCTCACTACTTTCACAGGTCTTTATCGGTATAGACTAGGGGAT GTAGTAGAAGTTGCTGGTTTCCACAAGAAGACCCCCAAACTCAACTTTATATGCAGGAGAAAGCTGATATTAACAGTAAACATCGATAAG AATACTGAACAGGACCTTCAGTTAGTGGTGGAGAGAGGTTCGCGAATACTAATAAGCAAGTCAAGAGCTGAGCTAGTAGACTTCACAAGC CATGCAAATGTATCAAAAAGACCAGGTCATTATGTGATCTATTGGGAAATCAAAGGTGATGTTGATGAAAATGTTTTTGGAGAGTGTTGT AGGGAGATGG |
Reverse sequence
not available
|
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U144810 | 3.8e-17 | 48 (10.4% of RFLP seq) | + |
SGN-U156301 | 4e-23 | 204 (44.3% of RFLP seq) | + |
SGN-U144809 | 460 (100.0% of RFLP seq) | + |
![]() |
| ![]() Tomato QTL map |
| ![]() Tomato-EXPIMP 2009 |
| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Pepper Capsicum |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
CT234 was used as an overgo probe on plate 14 [well F1]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GCAAGTCAAGAGCTGAGCTAGTAG
|
B sequence
GCATGGCTTGTGAAGTCTACTAGC
|
AB sequence
GCAAGTCAAGAGCTGAGCTAGTAGACTTCA
|
Marker sequence
ATACCACTACATAGAAGTAAGTCTCAAAGTTACAATAATAGCCACAAAGA
TGCTAATCTTCTAGCAAATGATGATTTTATTGAAGATGAGCCTGTTCCCT TATCTCAAGTCAAGATAGGACAAGAATATGAAATTGTCCTCACTACTTTC ACAGGTCTTTATCGGTATAGACTAGGGGATGTAGTAGAAGTTGCTGGTTT CCACAAGAAGACCCCCAAACTCAACTTTATATGCAGGAGAAAGCTGATAT TAACAGTAAACATCGATAAGAATACTGAACAGGACCTTCAGTTAGTGGTG GAGAGAGGTTCGCGAATACTAATAAGCAAGTCAAGAGCTGAGCTAGTAGA CTTCACAAGCCATGCAAATGTATCAAAAAGACCAGGTCATTATGTGATCT ATTGGGAAATCAAAGGTGATGTTGATGAAAATGTTTTTGGAGAGTGTTGT AGGGAGATGG |
![]() |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)