SGN Marker TG451

SGN-M19

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1400
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
Forward sequence
TATACTGTTTGACAAAATGCCTGTCAAAGATACGGTTATGTGGAACTTGATGATTAAAGGGTGTGTAGAGTGTGGGAATATGGAGATGGG
TTTGAAGCTATTTGAAGAAATGACCCAAAGAAATGTAGTTTCGTACACAACGATGATTAGCGGGTATTTGAAGTTTGGAAAGGTTGAAGA
GGCTGAGAGTTTGTTTTCGGAGATGCCACAAAGGGATGTGGCAGCTTGGAATGCTATGCTTTATGGGTATTTTGAGAATGGAAGAGTTGA
AGAGGCTGTTAAGTTGTTTGAGCTAATGCCTTATAGGAATGTGATTTCGTGGACGTCGGTTATTAGTGGGCTTGATCAGCATGGGAGGAG
TGATGAGGCTCTATTGATTTTCAAGAAGATGGTAAATTTCTTTATTGAACCTACTTCTAGTACTTTTGCTTCTGTTATTACAGCTTGTGC
TAATGCAAGGGATTTAGGTCTAGGTAGTGAAATTCATGCCTGTGTTGTGAAGCTTGGTTATCAGTATGATACTTATGTCACTGCTTCACT
AATCACATTGTATGGTAATTGCATGC
Reverse sequence
CTCTTTCGGCCAGTTCTAAGTTTAAATGCTTCTTACAACCACTAAGCAAAGCTAACCATATAGACAAATTTGGTCTCATGGGCATGCTTT
TCACCAAATCCTCTGCTTCATTTAACTTCCCACTTCTGCAAAGGATATCTACCATACAACTATAATGCTCAAGTGTCACTTCAATGGATG
AGCTTTGGGGGATATATTGAAATAAGCGTCTTCCTTTCTCTAGCATGCCAGAATGGCTACAAGCAGCAAGTAACCCAGTAAATGTAATAT
CATCCATATCAGCCCTTGAACGAACCATCTGGGCGAACAATGTGAGTGCCCAATTACCAAATCCATGTTGTGCACATCCAACGATGGTTG
AGTTCCACGAAACTGTGTTTTTTTCAGGGATCTCCTTGAATGCAATGAGTCCATCGTTTATATTTCCACACTTTGAATACAATACAACTA
GTGAATTGCCAACAAAGGCATCAGTGTTCAATCCCAGTTTGACTGCTACACCATGAATCTCTTTGCCAAGATCAATAGACTCCATTTCAC
AGGATGAATTTAGGGCACTAGTGAAGGAAGATTGATTGGGAAGTAGACCAATCCTAATCATGTCCCCAAACACTTTCAATGCTTCTTTGT
GCTTATAATTCA
RFLP sequence matches to unigenesNone
Mapped locations  
Map: Tomato QTL map   
Map version
137 (location: 53892)
Chromosome
2
Position
32.80 cM
Confidence
uncalculated
Protocol
RFLP

Dry_matter_weight_dmw2_1 Titratable_acidity_ta2_1 Eugenol_content_eug2_1 Fruit_weight_fw2_1Soluble_solid_content_ssc2_1 Sugar_content_suc2_1 3_Methylthio_propanal_content_mta2_1 Hex_3_en_1_ol_content__x3o2_1 Fruit_diameter_fd2_1 Color_a_a2_1 Dry_matter_weight_dmw2_2 Sugar_content_suc2_2 Soluble_solid_content_ssc2_2 Color_L_L2_1 Fruit_weight_fw2_2Titratable_acidity_ta2_2 Dry_matter_weight_dmw2_3 Color_b_b2_1Fruit_diameter_fd2_2 Elasticity_ela2_1 Carotene_content_car2_1 2_Isobutylthiazole_content_ibt2_1
Tomato QTL map

Map: Tomato - Kazusa and SolCAP markers mapped to genome   
Map version
105 (location: 50392)
Chromosome
2
Position
46.48 MB
Confidence
uncalculated
Protocol
unknown


Tomato - Kazusa and SolCAP markers mapped to genome

Map: Kazusa F2-2000 genetic map   
Map version
103 (location: 48326)
Chromosome
2
Position
53.33 cM
Confidence
uncalculated
Protocol
unknown


Kazusa F2-2000 genetic map

Map: Eggplant-COSII   
Map version
63 (location: 42464)
Chromosome
2
Position
28.50 cM
Confidence
F(LOD3)
Protocol
RFLP


Eggplant-COSII

Map: Tomato-EXPEN 2000   
Map version
52 (location: 40048)
Chromosome
2
Position
46.00 cM
Confidence
F(LOD3)
Protocol
RFLP


Tomato-EXPEN 2000

Map: Eggplant-LXM 2002   
Map version
29 (location: 7758)
Chromosome
2
Position
22.00 cM
Confidence
F(LOD3)
Protocol
RFLP


Eggplant-LXM 2002

Map: Tomato-EXPEN 1992   
Map version
28 (location: 7757)
Chromosome
2
Position
45.60 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG451 was used as an overgo probe on plate 16 [well B9]

Plausible BAC Matches:   P227E20,   P134A15

 Non-Plausible BAC matches

P002P16,   P330E02,   P110B11,   P096K18,   P303J10,   P118I17,   P277C14,   P072A04,   P079E04,   P168N18,   P096B03,   P217K16

 Overgo Sequences

A sequence
GAGGCTGAGAGTTTGTTTTCGGAG
B sequence
CATCCCTTTGTGGCATCTCCGAAA
AB sequence
GAGGCTGAGAGTTTGTTTTCGGAGATGCCA
Marker sequence
TATACTGTTTGACAAAATGCCTGTCAAAGATACGGTTATGTGGAACTTGA
TGATTAAAGGGTGTGTAGAGTGTGGGAATATGGAGATGGGTTTGAAGCTA
TTTGAAGAAATGACCCAAAGAAATGTAGTTTCGTACACAACGATGATTAG
CGGGTATTTGAAGTTTGGAAAGGTTGAAGAGGCTGAGAGTTTGTTTTCGG
AGATGCCACAAAGGGATGTGGCAGCTTGGAATGCTATGCTTTATGGGTAT
TTTGAGAATGGAAGAGTTGAAGAGGCTGTTAAGTTGTTTGAGCTAATGCC
TTATAGGAATGTGATTTCGTGGACGTCGGTTATTAGTGGGCTTGATCAGC
ATGGGAGGAGTGATGAGGCTCTATTGATTTTCAAGAAGATGGTAAATTTC
TTTATTGAACCTACTTCTAGTACTTTTGCTTCTGTTATTACAGCTTGTGC
TAATGCAAGGGATTTAGGTCTAGGTAGTGAAATTCATGCCTGTGTTGTGA
AGCTTGGTTATCAGTATGATACTTATGTCACTGCTTCACTAATCACATTG
TATGGTAATTGCATGC
Genomic location of TG451  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D19 marker 19
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