SGN Marker TG623
SGN-M192
Synonyms |
Locus associations |
RFLP details |
Insert size
2200
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
CTAAGCTGAGTCTTCATTGGTGCATTTTTGTAAGTTCCAGCTACAGTGAGAATGTGAGCATAGACCCATACAATCATCACAGAGAATATA
ACAGCAAACCGGTCGAAGACATGCTTATCCCCTTTCATCAAATGAGGTATGTACTGTATACAGACACGAAAATATTTGTTAACATGTTAG TTGAACTTGTAAAAGTCAGATTGAGGGCAACATTTTTTCGAAGTTCATAGAGTGAACTAGAAGAATTCTAAGAAAGTTGTGATCAAATGC ACCTGTGAAAAGATTAAGAGAATGATAAGCTGCGGCAATCCAATTTCTGCACATTTTGCTACCTATATGCAAAAAAGTCAGTTACCAGTT ACCATGACGTTTAAGCTTTTCATTTCAGTCAGAATCTAATTCGTAAAAATGTGACACAAATGGATTACCAGAGGAAAACCAAACTCATAT AATCCAAATCCTGATAGAGCTACCAATGGAATAGCGGAGAGTG |
Reverse sequence
CACCACCAAAACAGGATGAGAATATACCACATCCTGTTAAAGATCAGCTTCCAAATGTTTCTTACTGCATTACTAGTCCTCCACCTTGGC
GTAAGTTTCTATACCAACTTTCTTGAGAACACACTTTGTGCTTCATGCATATTTACTTCCCTCTATACGTTTCAGATTTTGAGATCCAAG CAAGTCTATCTTTGATCGNATTTTTTTTTTTTTTTTTTTTTTACGAATTTTGCATTGTCAATGGGGACTTAAACCCAATTTTAAATCTTC CCTCAAAGTTAAATTGTTGGGCTATCGAAAAAGGAAAAAAATCGGATTATATTTGGTTTCCCGGGGGGGATTAACAACGGACAATAACAA GGGACTTTGGGTAATTCTACAAGGGGAGTTCGGGGAGGGGGGTGTGCCCCCAATTTTGTTTTTCCCTTTTGAAAGAAGAAAACGGTTTTT GAAAAAACCCCAGCTCTTCCATGGGAAGATT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U145022 | 1.4e-07 | 44 (9.1% of RFLP seq) | - |
SGN-U145021 | 9.6e-15 | 44 (9.1% of RFLP seq) | - |
SGN-U161345 | 9.6e-15 | 44 (9.1% of RFLP seq) | - |
SGN-U145023 | 9.6e-15 | 44 (9.1% of RFLP seq) | - |
SGN-U164880 | 8.6e-43 | 90 (18.7% of RFLP seq) | - |
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| ![]() Tomato QTL map |
| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG623 was used as an overgo probe on plate 4 [well H12]
Plausible BAC Matches: None
Overgo Sequences
A sequence
AGTTCCAGCTACAGTGAGAATGTG
|
B sequence
TGTATGGGTCTATGCTCACATTCT
|
AB sequence
AGTTCCAGCTACAGTGAGAATGTGAGCATA
|
Marker sequence
CTAAGCTGAGTCTTCATTGGTGCATTTTTGTAAGTTCCAGCTACAGTGAG
AATGTGAGCATAGACCCATACAATCATCACAGAGAATATAACAGCAAACC GGTCGAAGACATGCTTATCCCCTTTCATCAAATGAGGTATGTACTGTATA CAGACACGAAAATATTTGTTAACATGTTAGTTGAACTTGTAAAAGTCAGA TTGAGGGCAACATTTTTTCGAAGTTCATAGAGTGAACTAGAAGAATTCTA AGAAAGTTGTGATCAAATGCACCTGTGAAAAGATTAAGAGAATGATAAGC TGCGGCAATCCAATTTCTGCACATTTTGCTACCTATATGCAAAAAAGTCA GTTACCAGTTACCATGACGTTTAAGCTTTTCATTTCAGTCAGAATCTAAT TCGTAAAAATGTGACACAAATGGATTACCAGAGGAAAACCAAACTCATAT AATCCAAATCCTGATAGAGCTACCAATGGAATAGCGGAGAGTG |
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