SGN Marker TG555
SGN-M197
Synonyms |
Locus associations |
RFLP details |
Insert size
1600
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG555 image not available
|
Forward sequence
AATTCGGAGCTCACTGCTTCTAATCCTCAGTGAGACTTATTTTCTACATATTAAACAATAAGAAATTTACGAAGGAATATTATAGACTGA
ATTCCTTGGTGACAAGTATCAAGACATCTTGACCAAGTTTAAAGTTTTGTAGTGGCAGTTCTTTTAAGCTTTACTTGTGTGAGGTAGACA TCAAGGAAGATAAGTAGCAGCTACTCTTCACGGAGCAGCCCATAGGACACTCAAATTCACTATTGCGAGGGTCAATCTACCAATTTATGG AACGATACCAGTAAAGTCATTTTTATGTAAACATCAGACAGCTTTTGACTAAGCAGAGACATGAATAAGTTCTATTTGTTAGAAGTCGAA GAGACAAATAAGTTAATTTCACCTATGCTATAAAAGAGGACTCTTATAGTTATAAATACAGTACATTTTATTAAGGGTTCTAATTGTTGA CTATGATAGCAAGCATGCCGTACTAATT |
Reverse sequence
ACATTTTGAGGAAGACAGGAGTTATGTATCGCCATCTGGTGTGCTCCAAGAACATGACAGATATAAAAGACCGCGGGGTGCACCAGAGAA
ATGTTGCATTGGAGCATATTGAACATCATAGGCTCAATGGAATTGTTTACTTTGCAGATGATGATAATATCTACTCACTTGAGTTGTTTG AGAGCATTAGATCGATCAAGTAAGTTGAGATTCATCAGTCTTGTTTACATGACTTGTCTTTGTTTTGTCCTGCTGTGAGCATGTTCAGGA TGATGTTATGTGCTTTATGTAGATGTTCAAGTCGATAATAGTGAATAGTCTAGAGCTATTTCACATATATTACAACTTCACTAACAAATT CTTTTCCTGGTGTCCTCGGTTCATCACTCTTCATAGTTATAAGAATAACAGTTGTAGATTAGACCACTGGTCGTGTGATTTTTGGACTTA ATTATTATCTCAATTCTTCCTCAAAATAGCAGTCCTTAGATTAGAAGCTGAGG |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U154985 | 1e-109 | 199 (39.6% of RFLP seq) | - |
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| ![]() Tomato QTL map |
| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG555 was used as an overgo probe on plate 8 [well A3]
Plausible BAC Matches: P110L05
Non-Plausible BAC matches
Overgo Sequences
A sequence
GTGTGAGGTAGACATCAAGGAAGA
|
B sequence
GAGTAGCTGCTACTTATCTTCCTT
|
AB sequence
GTGTGAGGTAGACATCAAGGAAGATAAGTA
|
Marker sequence
AATTCGGAGCTCACTGCTTCTAATCCTCAGTGAGACTTATTTTCTACATA
TTAAACAATAAGAAATTTACGAAGGAATATTATAGACTGAATTCCTTGGT GACAAGTATCAAGACATCTTGACCAAGTTTAAAGTTTTGTAGTGGCAGTT CTTTTAAGCTTTACTTGTGTGAGGTAGACATCAAGGAAGATAAGTAGCAG CTACTCTTCACGGAGCAGCCCATAGGACACTCAAATTCACTATTGCGAGG GTCAATCTACCAATTTATGGAACGATACCAGTAAAGTCATTTTTATGTAA ACATCAGACAGCTTTTGACTAAGCAGAGACATGAATAAGTTCTATTTGTT AGAAGTCGAAGAGACAAATAAGTTAATTTCACCTATGCTATAAAAGAGGA CTCTTATAGTTATAAATACAGTACATTTTATTAAGGGTTCTAATTGTTGA CTATGATAGCAAGCATGCCGTACTAATT |
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