SGN Marker T1515
SGN-M2059
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TPTAY42TH
Arabidopsis best BAC match: AC006416.2
Arabidopsis position: 1.0250000
Arabidopsis identities: 0.859
Best GenBank protein hit: AAD18099.1
Evalue: 1.2e-63
Identities: 0.839
Description: conceptual translation. [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TPTAY42TH
Arabidopsis best BAC match: AC006416.2
Arabidopsis position: 1.0250000
Arabidopsis identities: 0.859
Best GenBank protein hit: AAD18099.1
Evalue: 1.2e-63
Identities: 0.839
Description: conceptual translation. [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1515 was used as an overgo probe on plate 5 [well C4]
Plausible BAC Matches: P246E15, P014O14
Overgo Sequences
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A sequence
CAAGAGTCAATGGCTCGCATGAAC
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B sequence
GCCAGGAATCCTTCTTGTTCATGC
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AB sequence
CAAGAGTCAATGGCTCGCATGAACAAGAAG
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Marker sequence
TTCGACATGGATCTTAACCCACCTGCAGGGGAGGACTATGCACACCCACA
GATATGTTTTTTCCATGTGCTCTTCAAGGCAGCAGCATTAGCGTTTTATA TTCTGTCAGCTTTATTTGTTGATAGTTCTGTTATCATCTTTGTGGTAACT GTTCTTTTAGCTGCTCTTGACTTTTGGGTGGTTAAGAACGTCAGTGGACG TATTCTTGTGGGTTTAAGGTGGTGGAATGAAATAGATGACAATGGCGAGA GTGTGTGGAGATTTGAGTGCCTTGATCAAGAGTCAATGGCTCGCATGAAC AAGAAGGATTCCTGGCTGTTTTGGTGGACTTTGTACCTAACAGCTGTTGC TTGGATCTTTCTCGCGATATTCTCCCTCATTAGGTTCCAAGCTGATTATC TTCTCGTTGTTGGAGTTTGCTTGACTCTCAGCGTCGCAAATA |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1515
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| User comments |
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