SGN Marker T1583
SGN-M2111
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TPTBD87TH
Arabidopsis best BAC match: AB011479.1
Arabidopsis position: 5.2890000
Arabidopsis identities: 0.789
Best GenBank protein hit: BAB11551.1
Evalue: 1.4e-34
Identities: 0.756
Description: unknown protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TPTBD87TH
Arabidopsis best BAC match: AB011479.1
Arabidopsis position: 5.2890000
Arabidopsis identities: 0.789
Best GenBank protein hit: BAB11551.1
Evalue: 1.4e-34
Identities: 0.756
Description: unknown protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1583 was used as an overgo probe on plate 11 [well G10]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
ACCGATCACTTCCTTCTGATCGTC
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B sequence
CGGAAAAGTGATCGGAGACGATCA
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AB sequence
ACCGATCACTTCCTTCTGATCGTCTCCGAT
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Marker sequence
GGTCACCGATCACTTCCTTCTGATCGTCTCCGATCACTTTTCCGACCACT
TCATACTAATTCCGATTCATTATACAGAATCTGTATTAGAAAAACGTAAA AATGTGGGTGTTTTATCTGATCTCATTGCCTTTAACCCTAGGCATGGTGA TTTGGACTCTAAAGTACTTTTCTGGTCCAGAAGTGCCTCGTTACGTGTTC TTCACAGTTGGTTATACCTGGTTTTGCTCTATCTCCATTATTATCCTTGT GCCTGCCGATATTTGGACGACAATAGTTGGGAGTGATAATGGAGGCATAT CATTCTTTTGGAGCTGGTCATACTGGAGTACATTCCTACTCACATGGCTT GGTGTTCCCCTCATTCAAGGGTTTGAAGATGCTGGAGACTTTACACTTGT AGAGCGATTGAAGACTAGCATACA |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1583
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| User comments |
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