SGN Marker T1587
SGN-M2115
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TPTBF10TH
Arabidopsis best BAC match: AL078464.1
Arabidopsis position: 4.1530000
Arabidopsis identities: 0.637
Best GenBank protein hit: CAB80994.1
Evalue: 4.6e-25
Identities: 0.645
Description: putative protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TPTBF10TH
Arabidopsis best BAC match: AL078464.1
Arabidopsis position: 4.1530000
Arabidopsis identities: 0.637
Best GenBank protein hit: CAB80994.1
Evalue: 4.6e-25
Identities: 0.645
Description: putative protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1587 was used as an overgo probe on plate 1 [well F1]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
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A sequence
AGACTGACAGAGCAACCACAACTG
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B sequence
AACCCTAATCCCCTTGCAGTTGTG
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AB sequence
AGACTGACAGAGCAACCACAACTGCAAGGG
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Marker sequence
GGTTAAATATTCCGGTTAGACTGACAGAGCAACCACAACTGCAAGGGGAT
TAGGGTTTCAGATCTCAGCAAAAAACTTGCCGGAAAAATGGCGTTGAGGA ACTTCTACAAGGAGATAAAGGGATTGAAGGTGAAGGAGGTTCCGGGGTAC CTAAAGCCGATGCTCTCAGTCGGTTACGCGAAGAATGCTATCAGGAAGGG TTTGGATAACTACCATGCTAAGTACATCGAAACCAGCTCCGTTGATCCTC TTCTCCATGTCTGCTTCGGAGGCATGATATTGTCCTATCTCGTCGCCCTT CCAAATGAGCGACGTCACCTCGAGCATCAACAGCACGGCGGCGGACATTG ATTGTCCCTCCGATTTTCTAAGATTGATGATACAGTGAAGGACAAACATC TATCTCTGATGGTTGCTTTTACCCTCTTTTCA |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1587
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| User comments |
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