SGN Marker T1752
SGN-M2245
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 9.01
Tomato EST read: TRZBK71TH
Arabidopsis best BAC match: AB005230.2
Arabidopsis position: 5.0210000
Arabidopsis identities: 0.800
Best GenBank protein hit: BAA03923.1
Evalue: 4.5e-86
Identities: 0.932
Description: endo-xyloglucan transferase [Lycopersicon esculentum]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TRZBK71TH
Arabidopsis best BAC match: AB005230.2
Arabidopsis position: 5.0210000
Arabidopsis identities: 0.800
Best GenBank protein hit: BAA03923.1
Evalue: 4.5e-86
Identities: 0.932
Description: endo-xyloglucan transferase [Lycopersicon esculentum]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1752 was used as an overgo probe on plate 3 [well B4]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
ATGACGCTTGTTGGTGGAGACTCA
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B sequence
CAGTGACAACACCAGTTGAGTCTC
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AB sequence
ATGACGCTTGTTGGTGGAGACTCAACTGGT
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Marker sequence
TACACAAACACTGGTCTCTGATTGGATTTGTTTTTCTCACCATGGGTATC
ATAAAAGGAGTTTTATTTACTATTGTTTTGATTAATTTGTCACTTGTTGT ATTTTGTGGGTATCCTATAAGGCCAGTAAATGTGCCCTTTTGGAAAAACT ATGAGCCAAGTTGGGCTAGTCACCATATTAAGTTCCTCAATGGTGGTACC ACTACTGATCTTATTCTCGACAGATCTTCAAGAGCTGGATTTCAGTCAAA GAAATCATATCTGTTTGGGCATTTCAGTATGAAAATGACGCTTGTTGGTG GAGACTCAACTGGTGTTGTCACTGCATTTTACCTGTCATCGAATAATGCA GAGCACGATGAGATAAATTTTGAATTTTT |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1752
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| User comments |
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