SGN Marker TG134
SGN-M227
Synonyms |
Locus associations |
RFLP details |
Insert size
2500
|
Vector
pUC
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
ATAACTATGTTATATTATCTTTTCTGCTACACAATTGTCACAGAAGTGTTTCATTGTTAATGTTGCCTTCATTGTAATGTTACTGTAGGC
GAATGTGTGTTTTTGGCTTTCATAGCCCTATTCATGAACAAGCACAACATGGATGGTAATTTGGACCCCCTTTTCCTCTCCATACCCTCT TAACCCTCCTAGAATGCCCCGATCATTTCATTGTGTTTTTTTTTTATAGAAATAATTTGAAGATTCTCAAAGAACTAACCGGGACTTGGA ATTGTGATATGCTTGAAACTTATGTGATAATTCGGGACAGGAGCAGCCAAACTCCTCTTGTTAGTACCTTTAAAGATTGTTTACTTTGTT AGATGCTTATAGCCGGCTAAGAAACTGCTTTCTTTATAGTCTATTCAAGTCTAAATAGTACTGTAATTTGTTAGTTACTTAGGCTTAGTC TTGGTGATCTGTTTAAAATATCAGCTGTATACCAATGATCTCTTAGTACAG |
Reverse sequence
CGCATCAGTAAAAAAGAATCAATTTTTCCCAATTAAAAAAAAAAAAGCAAAAGAATCTAAAGACAACCCATTTCAAAGACGCATGTGAAG
TCCAAACCCCACCAATAAAAAACTAACCAATTTCACCAGAAAACTTCACCGAACTCAGCCACCACTATAAAGTAAGGGACTGTAATCTTG AAAAATGATTTGGGGGTGTTGAAGATAAAGAAAAAAGCTCACTCTTTTTCAGAGGTTGGTGAGAAAAGGGTCACACAAGATTAGAGCAGG CATGTGCTGGGGCATTTGTTGGAGATTTGGGTCCTCCTCTCATTTTGCCCCATTATCTACACACAAAGGCGCAGGTTTTTACAGTAAAGA AAATTTTCCAATTGGACAAAAAATATGTTATTTTTTTTTAGTTATTATAACAAAAGTCTCTTGTTTTTTCCTTCAAAACATAAGGAAAGT GGTCTTTTATTTTTATAGCCAAATGGAGATGGATGATAATTAATTGGAAGATTATGTAATTAATTGGAAGATT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U171437 | 9.7e-09 | 34 (6.5% of RFLP seq) | - |
SGN-U171437 | 1.8e-59 | 115 (22.0% of RFLP seq) | - |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 2000 |
| ![]() Pepper-AC99 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
TG134 was used as an overgo probe on plate 4 [well B6]
Plausible BAC Matches: P061L22, P262I04, P187G12, P201C17, P055P11, P270H08, P318C22, P138L01, P280I15
Overgo Sequences
A sequence
CCCTTTTCCTCTCCATACCCTCTT
|
B sequence
GCATTCTAGGAGGGTTAAGAGGGT
|
AB sequence
CCCTTTTCCTCTCCATACCCTCTTAACCCT
|
Marker sequence
ATAACTATGTTATATTATCTTTTCTGCTACACAATTGTCACAGAAGTGTT
TCATTGTTAATGTTGCCTTCATTGTAATGTTACTGTAGGCGAATGTGTGT TTTTGGCTTTCATAGCCCTATTCATGAACAAGCACAACATGGATGGTAAT TTGGACCCCCTTTTCCTCTCCATACCCTCTTAACCCTCCTAGAATGCCCC GATCATTTCATTGTGTTTTTTTTTTATAGAAATAATTTGAAGATTCTCAA AGAACTAACCGGGACTTGGAATTGTGATATGCTTGAAACTTATGTGATAA TTCGGGACAGGAGCAGCCAAACTCCTCTTGTTAGTACCTTTAAAGATTGT TTACTTTGTTAGATGCTTATAGCCGGCTAAGAAACTGCTTTCTTTATAGT CTATTCAAGTCTAAATAGTACTGTAATTTGTTAGTTACTTAGGCTTAGTC TTGGTGATCTGTTTAAAATATCAGCTGTATACCAATGATCTCTTAGTACA G |
Marker Submitted By |
Name: Molly Jahn
Organization: Cornell University
Organization: Cornell University
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User comments |
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