SGN Marker TG283
SGN-M231
Synonyms |
Locus associations |
RFLP details |
Insert size
1400
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG283 image not available
|
Forward sequence
CAAAAAGAAAATTGACATATAATTAAAATTAGAAAATATTTTTGAGTTATTTCTGACACATCAAAGGGATTTCCCTTTTCTTTTTTTTTT
TTAAATCTAACAGGTAGAAAAAAGGGCAAATCTGAACCATTCCTCAAAAGGAGGCATTTCTGAACCATTCCAATTGTGTCAAGAGCATTT TTTACCCAATAGGTTGAGTTAAGAGAAAATTAAATCCAATAGGTAGAAGGGCATCTCTGAAGTATTTTTTAATATGTTAAAAGGGCATTT TAGAACCTTTTCAGAATAAAATAAGATGGCTGTTGGAAGCTCGGAATCCAGCTCGCATTGCTTTCCGCAAGAGCAAAAGCTGTTCAGTAA CTAGACCAGTGACCAAACGAGACTTCGTGTACAAAAAAAAACAAACTGTGCCCCCACACCTTCCACGAGGGTCCGCCTCTACGAAGAATA AAAGTTTTGATAACCTTAGACATGATATACAATCAAACACGCCGCTGCAAAATT |
Reverse sequence
TATAGGGAGACAAGCTTGCATGCCTGCAGCTGTGAGACACACAGGGCAATACAAAAACAAATGATTGATGGTTTCTGGATAAATTCCATA
AAGGTAGATTTTCCTGTGTCAAGTTGAGTTTTTGTCGCTAGCCACACATGATATGCAACTTCCACTGGTGCTTTAGATCTCCATATGCTT TTCCAAGGCAACGAGTTATCATACTGTGAATCGGCAACTAAGTTCATAATATGAGTTAGTAGTATTGGATCTCCGTATGTTTGTCCACAC ATTATGGTGTATCTCTTGATTCTGTCATCCCCCCACTTTAATTTTTTCTTTTAAAGATGATGTTCGGCCAAAGTCCTGTCATAATATCCA ATTCTCTTGGTTCCTTGTGTTTCTCCTTTTTGGTTTGGTGGTGACACTTGAGATTACAAAACAAGTACTGCTGTTGGTATCCACCACATT TATGGCACTTGTCTTTTGGAGTTTGAACTATGAGTTGATTTAAATGGAGTGACATGGATTCGTACAGTCAATTCCAGCTTAGATTGGGAT TGAGGCATTA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U149856 | 1.1e-20 | 50 (9.9% of RFLP seq) | + |
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| ![]() Potato meta-QTL consensus map |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
TG283 was used as an overgo probe on plate 7 [well A3]
Plausible BAC Matches: P169P18, P093H06, P322C23, P119J03, P282K08, P202O12, P148A21, P288A04, P198J17, P077I15, P251A18, P156N23, P005C19, P256L23, P255E04, P270B18, P331L16, P319A17, P152A18, P192H18, P315P01, P233G20, P309I22, P331C15, P120I01, P043K11, P214M13
Overgo Sequences
A sequence
GATGGCTGTTGGAAGCTCGGAATC
|
B sequence
AAAGCAATGCGAGCTGGATTCCGA
|
AB sequence
GATGGCTGTTGGAAGCTCGGAATCCAGCTC
|
Marker sequence
CAAAAAGAAAATTGACATATAATTAAAATTAGAAAATATTTTTGAGTTAT
TTCTGACACATCAAAGGGATTTCCCTTTTCTTTTTTTTTTTTAAATCTAA CAGGTAGAAAAAAGGGCAAATCTGAACCATTCCTCAAAAGGAGGCATTTC TGAACCATTCCAATTGTGTCAAGAGCATTTTTTACCCAATAGGTTGAGTT AAGAGAAAATTAAATCCAATAGGTAGAAGGGCATCTCTGAAGTATTTTTT AATATGTTAAAAGGGCATTTTAGAACCTTTTCAGAATAAAATAAGATGGC TGTTGGAAGCTCGGAATCCAGCTCGCATTGCTTTCCGCAAGAGCAAAAGC TGTTCAGTAACTAGACCAGTGACCAAACGAGACTTCGTGTACAAAAAAAA ACAAACTGTGCCCCCACACCTTCCACGAGGGTCCGCCTCTACGAAGAATA AAAGTTTTGATAACCTTAGACATGATATACAATCAAACACGCCGCTGCAA AATT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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