SGN Marker TG429
SGN-M233
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
1400
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
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Forward sequence
CAGCTTCACAGTCAACCAAGACCATATTAAAATGTTGATTATCAATATGTATAGCTCAGGAGTTTAAGACTAGATGAAAAATGATCCAAC
TCACCGCACAAGAACATATGGTGACGCCTACAGCTGCCAATGCTGAAGTAATATCCGCCATCATGCCTAAATGAATTATAGTGGTTTGAG GTGTCAGCCATGACAAGTAATAAACCATGAAAAATGTTGGATACATATTAAAATTTCTATAAATCAACAAATGCCAGGTCAGAGAACATA AGGTTAATAGACTGGAATACACGTAGTTGGAACTATACAAAGTACATCAAAAATAAAGAAGAACAAGAGTTATATCTTCTACGTCGATGG AATCCCACCAACCCCAAATCCTGGCATACTCTCACACACTTCTCTGGTTATTCAAAAGTCTGATGTCATGCTTTTGAACTTGAAAATTTG ATCCTCAAGGTAGGCAAACTTTTAAATACGTATTTCTGACAAGCCTCTCTCTCA |
|
Reverse sequence
GGAGACAACCTTGCATGCCTGCAGAGTTAGAATGGAAATTCTTCATGTACTTTTACTACTACAAATTAACTGATGTGGAGCTCATCTTTT
CTTCAGTTTTTGAGAGAGCAAGCTGCACTATCAGCATCTGAAATAACTGTGGATTCAGTTAAGGAATTTGCTGCTGAGTCTGAAGGGGAC AGCACAGTGGAAGAATTAGCAGATTACTCAAAGGGAACCAAACATTCGTGGGAGAAAATCCTCAAGAATGTTATGGAGGTATCATCTGCA AGGACAAATGGTGAAGATATTTTCCAACTCCGTAGTGGTAGTATTCAAATTCCCAAGGTAAATGGGAAACATAATAAGTGCATGCAGCAT ACGAGTTTGAAGGCCACTGGGGAGACATTGTCACAAGGAAATGGTGTTGGTGAAATGATACTTGCTAACATACCAAGGTACAGGGATGTT CTGCCCGGATTGGACGGCTGGCTGGCTACCAAAGTTGCAACTTGGCAGAACCTGGAAGGGCACTCTGTGCAGTGGTTTTGTGTTA |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U150766 | 7.2e-25 | 65 (12.9% of RFLP seq) | + |
| SGN-U161667 | 7.4e-59 | 142 (26.5% of RFLP seq) | - |
| SGN-U150766 | 2e-65 | 205 (38.3% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
TG429 was used as an overgo probe on plate 15 [well B8]
Plausible BAC Matches: None
Overgo Sequences
|
A sequence
CACCGCACAAGAACATATGGTGAC
|
|
B sequence
ATTGGCAGCTGTAGGCGTCACCAT
|
|
AB sequence
CACCGCACAAGAACATATGGTGACGCCTAC
|
|
Marker sequence
CAGCTTCACAGTCAACCAAGACCATATTAAAATGTTGATTATCAATATGT
ATAGCTCAGGAGTTTAAGACTAGATGAAAAATGATCCAACTCACCGCACA AGAACATATGGTGACGCCTACAGCTGCCAATGCTGAAGTAATATCCGCCA TCATGCCTAAATGAATTATAGTGGTTTGAGGTGTCAGCCATGACAAGTAA TAAACCATGAAAAATGTTGGATACATATTAAAATTTCTATAAATCAACAA ATGCCAGGTCAGAGAACATAAGGTTAATAGACTGGAATACACGTAGTTGG AACTATACAAAGTACATCAAAAATAAAGAAGAACAAGAGTTATATCTTCT ACGTCGATGGAATCCCACCAACCCCAAATCCTGGCATACTCTCACACACT TCTCTGGTTATTCAAAAGTCTGATGTCATGCTTTTGAACTTGAAAATTTG ATCCTCAAGGTAGGCAAACTTTTAAATACGTATTTCTGACAAGCCTCTCT CTCA |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of TG429
|
| User comments |
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