SGN Marker TG429
SGN-M233
Synonyms |
Locus associations |
RFLP details |
Insert size
1400
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
CAGCTTCACAGTCAACCAAGACCATATTAAAATGTTGATTATCAATATGTATAGCTCAGGAGTTTAAGACTAGATGAAAAATGATCCAAC
TCACCGCACAAGAACATATGGTGACGCCTACAGCTGCCAATGCTGAAGTAATATCCGCCATCATGCCTAAATGAATTATAGTGGTTTGAG GTGTCAGCCATGACAAGTAATAAACCATGAAAAATGTTGGATACATATTAAAATTTCTATAAATCAACAAATGCCAGGTCAGAGAACATA AGGTTAATAGACTGGAATACACGTAGTTGGAACTATACAAAGTACATCAAAAATAAAGAAGAACAAGAGTTATATCTTCTACGTCGATGG AATCCCACCAACCCCAAATCCTGGCATACTCTCACACACTTCTCTGGTTATTCAAAAGTCTGATGTCATGCTTTTGAACTTGAAAATTTG ATCCTCAAGGTAGGCAAACTTTTAAATACGTATTTCTGACAAGCCTCTCTCTCA |
Reverse sequence
GGAGACAACCTTGCATGCCTGCAGAGTTAGAATGGAAATTCTTCATGTACTTTTACTACTACAAATTAACTGATGTGGAGCTCATCTTTT
CTTCAGTTTTTGAGAGAGCAAGCTGCACTATCAGCATCTGAAATAACTGTGGATTCAGTTAAGGAATTTGCTGCTGAGTCTGAAGGGGAC AGCACAGTGGAAGAATTAGCAGATTACTCAAAGGGAACCAAACATTCGTGGGAGAAAATCCTCAAGAATGTTATGGAGGTATCATCTGCA AGGACAAATGGTGAAGATATTTTCCAACTCCGTAGTGGTAGTATTCAAATTCCCAAGGTAAATGGGAAACATAATAAGTGCATGCAGCAT ACGAGTTTGAAGGCCACTGGGGAGACATTGTCACAAGGAAATGGTGTTGGTGAAATGATACTTGCTAACATACCAAGGTACAGGGATGTT CTGCCCGGATTGGACGGCTGGCTGGCTACCAAAGTTGCAACTTGGCAGAACCTGGAAGGGCACTCTGTGCAGTGGTTTTGTGTTA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U150766 | 7.2e-25 | 65 (12.9% of RFLP seq) | + |
SGN-U161667 | 7.4e-59 | 142 (26.5% of RFLP seq) | - |
SGN-U150766 | 2e-65 | 205 (38.3% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG429 was used as an overgo probe on plate 15 [well B8]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CACCGCACAAGAACATATGGTGAC
|
B sequence
ATTGGCAGCTGTAGGCGTCACCAT
|
AB sequence
CACCGCACAAGAACATATGGTGACGCCTAC
|
Marker sequence
CAGCTTCACAGTCAACCAAGACCATATTAAAATGTTGATTATCAATATGT
ATAGCTCAGGAGTTTAAGACTAGATGAAAAATGATCCAACTCACCGCACA AGAACATATGGTGACGCCTACAGCTGCCAATGCTGAAGTAATATCCGCCA TCATGCCTAAATGAATTATAGTGGTTTGAGGTGTCAGCCATGACAAGTAA TAAACCATGAAAAATGTTGGATACATATTAAAATTTCTATAAATCAACAA ATGCCAGGTCAGAGAACATAAGGTTAATAGACTGGAATACACGTAGTTGG AACTATACAAAGTACATCAAAAATAAAGAAGAACAAGAGTTATATCTTCT ACGTCGATGGAATCCCACCAACCCCAAATCCTGGCATACTCTCACACACT TCTCTGGTTATTCAAAAGTCTGATGTCATGCTTTTGAACTTGAAAATTTG ATCCTCAAGGTAGGCAAACTTTTAAATACGTATTTCTGACAAGCCTCTCT CTCA |
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