SGN Marker TG8
SGN-M265
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
800
|
Vector
pUC
|
Cutting Site
EcoR1/HindIII
|
Drug Resistance
AMP
|
Image
TG8 image not available
|
|
Forward sequence
TTTTTTTTTCAGAATTGATCACAAAATCACTGTGATCCAACTTTGGTTTTTCTCTTTTATGTGCAGAATGTTGTGTTTTTATCTGATTTC
TCTCCACTAAATCAGTTTCCCACTCAAAGTCCCAGGAGAAGATTTTCCAAGAAAATTGTTTCTATGATCACACAACCAAGTTCAAGAATG CCTGCCACCACTGGCTCAGTTGAGTTTATATTGTTTTCTATCACATACCTATGCGTGTGGCTTAGTGATCAATGAAGTAACTTGATAAGT TTATTGTTCAAACTCTAGCACAAACAAAAACAATAGGTGATCTCTTTCTATCTGCCCTACCCTTGGTTGACAGACTTAGCTGATATGTGA CGTTGGTCGGAGGAAATAAGTATCCCGTAGATTTAGTTGAGGTGCGCAAAAGCTGGCCTAGACACCACAGTTATAAAAAAAATACTAGGT GATTTCTTCCATTGTCTTAGTCTTAGTGGACAGAGTTACATGTTACTAGTGGGAGGTGACAAGTATCCCATGAAACTAGTTGAGGTGCGA GAAAGTTGACCT |
|
Reverse sequence
CACTTCTCCCCATAGTCATAAACTCTTCACCTAAAAAAACAAAAAAATCACAATCACAAGCATCAAGTACCATTAAGCTATATGGAAAGT
TTGCAACTTTATTCCCCAAATATGAAAAGGGGAATTATTTTATTATCATCGCGGTGTCTAGGTCAACTTTCTCGCACCTCAACTAGTTTC ATGGGATACTTGTCACCTCCCACTAGTAACATGTAACTCTGTCCACTAAGACTAAGACAATGGAAGAAATCACCTAGTATTTTTTTTATA ACTGTGGTGTCTAGGCCAGCTTTTGCGCACCTCAACTAAATCTACGGGATACTTATTTCCTCCGACCAACGTCACATATCAGCTAAGTCT GTCAACCAAGGGTAGGGCAGATAGAAAGAGATCACCTATTGTTTTTGTTTGTGCTAGAGTTTGAACAATAAACTTATCAAGTTACTTCAT TGATCACTAAGCCACACGCATAGGTATATGATAGAAAACAATATAAACTCAACTGAGCCAGTGGTGGCAGGCATTCTTGAACTTGGTTGT G |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U151175 | 4e-08 | 29 (5.3% of RFLP seq) | + |
| SGN-U168565 | 5.7e-72 | 136 (24.6% of RFLP seq) | + |
| SGN-U151175 | 4e-08 | 29 (5.4% of RFLP seq) | - |
| SGN-U168565 | 1.1e-14 | 40 (7.4% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato QTL map |
|  Potato meta-QTL consensus map |
|  Tomato-EXPEN 1992 |
|  Potato-TXB 1992 |
| Overgo hybridization and physical mapping |
TG8 was used as an overgo probe on plate 14 [well F12]
Plausible BAC Matches: None
Non-Plausible BAC matches
P155H12,
P298I07,
P138C11,
P249G23,
P308E15,
P145N22,
P047D08,
P297K19,
P038B23,
P076M05,
P150P22,
P276B16,
P004P04,
P141C05,
P128I14,
P015M17,
P208G11,
P272A18,
P212H22,
P309B03,
P257P15,
P168F15,
P234G07,
P101M24,
P213B22,
P283G13,
P145P24,
P080A17,
P240J24,
P282I23,
P176O03,
P151P01,
P264E07,
P315H06,
P070P02,
P139A13,
P231M08,
P003E23,
P187E02,
P022A07,
P270N08,
P257D16,
P021I18,
P179C08,
P105D12,
P036I12,
P306H13,
P176P11,
P095G24,
P101M11,
P246I13,
P149F06,
P075C11,
P108J20,
P081C16,
P004I18,
P099H20,
P304N18,
P128P09,
P161F24,
P261M08,
P114E20,
P107O13,
P244I07,
P112H17,
P163E13,
P059D21,
P163J23,
P122F17,
P310A21,
P176E03,
P174M03,
P124M14,
P100I06,
P139E08,
P024M07,
P141E11,
P093J12,
P092C18,
P079P03,
P157H24,
P279C12,
P021D21,
P216K12,
P216I09,
P248K02,
P287D14,
P011K19,
P110J23,
P307J13,
P212A18,
P270J22,
P212M03,
P163N16,
P110H09,
P161I08,
P005J17,
P089D15,
P006A24,
P251J06,
P288M22,
P070F06,
P184M15,
P317E24,
P084P13,
P076B14,
P171B14,
P283P11,
P285F14,
P158K07,
P005D23,
P285G17,
P183N12,
P007J14,
P260N08,
P275K05,
P113E18,
P329H05,
P152L18,
P117F02,
P270P22,
P108E12,
P064K05
Overgo Sequences
|
A sequence
TTAGTTGAGGTGCGCAAAAGCTGG
|
|
B sequence
AACTGTGGTGTCTAGGCCAGCTTT
|
|
AB sequence
TTAGTTGAGGTGCGCAAAAGCTGGCCTAGA
|
|
Marker sequence
TTTTTTTTTCAGAATTGATCACAAAATCACTGTGATCCAACTTTGGTTTT
TCTCTTTTATGTGCAGAATGTTGTGTTTTTATCTGATTTCTCTCCACTAA ATCAGTTTCCCACTCAAAGTCCCAGGAGAAGATTTTCCAAGAAAATTGTT TCTATGATCACACAACCAAGTTCAAGAATGCCTGCCACCACTGGCTCAGT TGAGTTTATATTGTTTTCTATCACATACCTATGCGTGTGGCTTAGTGATC AATGAAGTAACTTGATAAGTTTATTGTTCAAACTCTAGCACAAACAAAAA CAATAGGTGATCTCTTTCTATCTGCCCTACCCTTGGTTGACAGACTTAGC TGATATGTGACGTTGGTCGGAGGAAATAAGTATCCCGTAGATTTAGTTGA GGTGCGCAAAAGCTGGCCTAGACACCACAGTTATAAAAAAAATACTAGGT GATTTCTTCCATTGTCTTAGTCTTAGTGGACAGAGTTACATGTTACTAGT GGGAGGTGACAAGTATCCCATGAAACTAGTTGAGGTGCGAGAAAGTTGAC CT |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of TG8
|
| User comments |
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