SGN Marker TG443

SGN-M270

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1700
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG443 image not available
Forward sequence
AACTTTCTCGGCAGATGCATGTGTGAAGAACTCCACAAAACCATACCCTTCAGAGAAACCAGTCTGTTTATTGCGAATTACCTTGATGGA
GGCAACCTGCACAAACAAGAACCATATAAGCTGACAAGAAAATTATGAGGTCAAAGACTTCACTTTTTCCCCATATGGAGAAATCATTTT
TGGGTGGGCAATGGGTCAATATTTAACCTCCAAGCACATTCAAGAATTTCAAATGGCCTGAATCATCATGCAAGAGTTTCTCATTCTGCT
TCCAACTTAATAAATGTTGAATAGCTACCAGGAGTTTATATGATGTCACTAATTACTTAGTATTTTCTTGTCATTCAATATGAATACTAG
AGAGCCTCAATGTTCACCAACTTGGGTGTGTCATGACATATCATGCTCATTGGCATGGGCAGACATATCATGTTCATTGACATATGCAAT
ACAATTCATGTGTGTTGTGCTGTTAGTACAGAGTAATGTTGTGTGCCA
Reverse sequence
GGAGACAGCTTGCATGCCTGCAGCGGTTGTACCCGTGGCGGCGGCGGCGCCAGCAGGGGCGCAGCAGCAGCCGTGGGTGGCGATGCAGTA
CCCGGCGGCGGCGATGGTAATGCAGCATCCAATGATGCCGGCCCCACATTATCCACCGCACTATATGCCGTTTCATCCACAACACCATCA
CCACCTTATCCACCACCCACCGCACTCACCGTCACCGCATCAACAAGGTGGAGGTGGAGGATCTAATAATAATGAGAATCGAACGATCTG
GGTGGGTGACCTTCATAATTGGATGGATGAGGATTATCTACGTAGCTGCTTCGCTACCACTAATGAGGTATAAGTCTGTACCAGTTTACG
CTCATGCATATATTTATATATATTTGGTGCTCTGTTTTTTTAAACACGTGATTTATGTTTTTCTATAAATGTTTTCATGTGATTAATTAC
AGTAAAATCTGGATTTATTGAATGGGGTAGAATGATGGCAGGTAGCTACTAGTTAGCCGCCGTCACAAGTAAAGTTTTTATATT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1451792.4e-4998 (19.7% of RFLP seq)+
SGN-U1614041.2e-60117 (21.9% of RFLP seq)-
SGN-U145179322 (60.3% of RFLP seq)-
Mapped locations  
Map: Potato meta-QTL consensus map   
Map version
107 (location: 53325)
Chromosome
4
Position
62.37 cM
Confidence
uncalculated
Protocol
unknown

MQTL_1_Maturity_4 MQTL_1_Late_blight_5.2 MQTL_2_Late_blight_4
Potato meta-QTL consensus map

Map: Tomato - Kazusa and SolCAP markers mapped to genome   
Map version
105 (location: 50390)
Chromosome
4
Position
61.41 MB
Confidence
uncalculated
Protocol
unknown


Tomato - Kazusa and SolCAP markers mapped to genome

Map: Kazusa F2-2000 genetic map   
Map version
103 (location: 48324)
Chromosome
4
Position
95.42 cM
Confidence
uncalculated
Protocol
unknown


Kazusa F2-2000 genetic map

Map: Tomato-EXPEN 2000   
Map version
52 (location: 40046)
Chromosome
4
Position
105.00 cM
Confidence
F(LOD3)
Protocol
RFLP


Tomato-EXPEN 2000

Map: Tomato-EXPEN 1992   
Map version
28 (location: 8772)
Chromosome
4
Position
104.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992

Map: Potato-TXB 1992   
Map version
27 (location: 8776)
Chromosome
4
Position
54.20 cM
Confidence
I(LOD2)
Protocol
RFLP


Potato-TXB 1992
Overgo hybridization and physical mapping 
TG443 was used as an overgo probe on plate 7 [well C4]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
TAGAGAGCCTCAATGTTCACCAAC
B sequence
GTCATGACACACCCAAGTTGGTGA
AB sequence
TAGAGAGCCTCAATGTTCACCAACTTGGGT
Marker sequence
AACTTTCTCGGCAGATGCATGTGTGAAGAACTCCACAAAACCATACCCTT
CAGAGAAACCAGTCTGTTTATTGCGAATTACCTTGATGGAGGCAACCTGC
ACAAACAAGAACCATATAAGCTGACAAGAAAATTATGAGGTCAAAGACTT
CACTTTTTCCCCATATGGAGAAATCATTTTTGGGTGGGCAATGGGTCAAT
ATTTAACCTCCAAGCACATTCAAGAATTTCAAATGGCCTGAATCATCATG
CAAGAGTTTCTCATTCTGCTTCCAACTTAATAAATGTTGAATAGCTACCA
GGAGTTTATATGATGTCACTAATTACTTAGTATTTTCTTGTCATTCAATA
TGAATACTAGAGAGCCTCAATGTTCACCAACTTGGGTGTGTCATGACATA
TCATGCTCATTGGCATGGGCAGACATATCATGTTCATTGACATATGCAAT
ACAATTCATGTGTGTTGTGCTGTTAGTACAGAGTAATGTTGTGTGCCA
Genomic location of TG443  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D270 marker 270
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