SGN Marker TG606

SGN-M304

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
950
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG606 image not available
Forward sequence
GAGACAGCTTGCATGCCTGCAAATGATACTATCTTATATATCACATTCCTGCTACTTCTCCATTTACATCACTTCTCTTCCCATATGAGT
TCCTCCTCCCATTCCGCATATGTTCGTTGGATGTGCATTTAGTTGACCAGTCTAAGTTATATGTGTTCTACATAATCACTTTCTAAAAAC
AAACATTGAATAGTGTTGGCTATAACACAATTGACATTGTAATTATATATCCGTCTCCAGTTTGTCAATGTATCACAACTATATATTCTG
TCCATGTCTACTAATCTTAGTATAAATTTCTATTTTAGTACATCTTGATTGTAAATCACTCCCTTCTAGCTAACCTTTACATATTATCCT
GTGTATTTGACTATATGTCACTTTTTGATGGTCCTGGACATTGTACTCTGGTTGCTTTTAAAGTTACAATATTTACAACTTTTTGTAGAA
ACGATGCGACATAAATAAGGTGAATCGAACTACTCTTAAATCTAATCATTTAATGGGGTCAAAGGCTTTTGTACCTGCTTGGGCT
Reverse sequence
GGAGACAGCTTGCATGCCTGCAGATGATACTATCTTATATATCACATTCCTGCTACTTCTCCATTTACATCACTTCTCTTCCCATATGAG
TTCCTCCTCCCATTCCGTATATGTTCGTTGGATGTGCATTTAGTTGACCAGTCTAAGTTATATGTGTTCAAGATAATCACTTTCAAAGAA
CAAACATTGAATAGTGTTGGCTATAACACAATTGACATTGTAATTATATATCCATCTCCAGTTTGTCAATGTATCACAACTATATATTCT
GTCCAGTTCTACTAATCTTAGTATAAATTTCGATTTTAGTACATCTTGATTGTAAATCACTCCCTTCTAGCTAACCTTTGCATATTATCC
TTGTAGTTTGTTATATGTACTTTTTATGGTCCTGGACATTGTACTCTGGTTGTTTTTAAAGTTACAATATTTACAACTTTTTGTAGAAAC
GATGCGACATAAATAAGGTGAATCGAACTAAGCTTAAATCTAATCATTTAATGGGGTCAAAGGCTTTTGTAGCTGCTT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1461363.4e-3383 (15.5% of RFLP seq)+
SGN-U1461362.3e-4083 (15.7% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 8844)
Chromosome
5
Position
42.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG606 was used as an overgo probe on plate 15 [well A4]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

 Overgo Sequences

A sequence
CCATATGAGTTCCTCCTCCCATTC
B sequence
CCAACGAACATATGCGGAATGGGA
AB sequence
CCATATGAGTTCCTCCTCCCATTCCGCATA
Marker sequence
GAGACAGCTTGCATGCCTGCAAATGATACTATCTTATATATCACATTCCT
GCTACTTCTCCATTTACATCACTTCTCTTCCCATATGAGTTCCTCCTCCC
ATTCCGCATATGTTCGTTGGATGTGCATTTAGTTGACCAGTCTAAGTTAT
ATGTGTTCTACATAATCACTTTCTAAAAACAAACATTGAATAGTGTTGGC
TATAACACAATTGACATTGTAATTATATATCCGTCTCCAGTTTGTCAATG
TATCACAACTATATATTCTGTCCATGTCTACTAATCTTAGTATAAATTTC
TATTTTAGTACATCTTGATTGTAAATCACTCCCTTCTAGCTAACCTTTAC
ATATTATCCTGTGTATTTGACTATATGTCACTTTTTGATGGTCCTGGACA
TTGTACTCTGGTTGCTTTTAAAGTTACAATATTTACAACTTTTTGTAGAA
ACGATGCGACATAAATAAGGTGAATCGAACTACTCTTAAATCTAATCATT
TAATGGGGTCAAAGGCTTTTGTACCTGCTTGGGCT
Genomic location of TG606  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D304 marker 304
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