SGN Marker TG629

SGN-M355

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1300
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG629 image not available
Forward sequence
TACTCAACTAGCAGCAAACTAGATATTTTATTATGTATCTATTTTCTAAAATTTGTATAATGTTATCTACTTCTACTGGCACCCATGCTA
CAAGAAGCTTAAATGGTGCACTTTATTGAATACAACAAAGATTTCAAGCCATGCTGAGAAGACTACTGAAAGAGAGAGTCTCATACATAC
ACTGAATGATGATATGAATTATCTTTCTTTTCTAACAATTGCATGAAAAGAGCAGTTAAATCTTAAATGAGTTGTTCTAGTTCAGATGAA
TAGACAGGGCAAGAGGATCATCTTCTATCTTTATGCAGAACAGTGATTGATAGGCTTAACAGAATTGGCAACACACAACATACTACTCAA
AATGAACATAAACAGATACATCAAGTTCCAGAGGGAGCACAATGGAACAGAGATGCAAACTGACGACACTATTAACATAGGCAAGAATTG
CCTTTCGGTTCAGACAATATCTCAAACGAGATGGTAATATGCTTTGCTGAATAAGAC
Reverse sequence
CAGGTTACTCAACTAGCAGCAAACTAGATATTTTATTATGTATCTATTTTCTAAAATTTGTATAATGTTATCTACTTCTACTGGCACCCA
TGCTACAAGAAGCTTAAATGGTGCACTTTATTGAATACAACAAAGATTTCAAGCCATGCTGAGAAGACTACTGAAAGAGAGAGTCTCATA
CATACACTGAATGATGATATGAATTATCTTTCTTTTCTAACAATTGCATGAAAAGAGCAGTTAAATCTTAAATGAGTTGTTCTAGTTCAG
ATGAATAGACAGGGCAAGAGGATCATCTTCTATCTTTATGCAGAACAGTGATTGATAGGCTTAACAGAATTGGCAACACACAACATACTA
CTCAAAATGAACATAAACAGATACATCAAGTTCCAGAGGGAGCACAATGGAACAGAGATGCAAACTGACGACACTATTAACATAGGCAAG
AATTGCCTTTCGGTTCAGACAATATCTCAAACGAGATGGTAATA
RFLP sequence matches to unigenesNone
Mapped locations  
Map: Tomato-EXPIMP 2009   
Map version
126 (location: 53578)
Chromosome
11
Position
0.00 cM
Confidence
uncalculated
Protocol
RFLP


Tomato-EXPIMP 2009

Map: Potato meta-QTL consensus map   
Map version
107 (location: 53370)
Chromosome
11
Position
23.09 cM
Confidence
uncalculated
Protocol
unknown

MQTL_1_Late_blight_11 MQTL_1_Maturity_11 MQTL_2_Late_blight_11 MQTL_2_Maturity_11
Potato meta-QTL consensus map

Map: Tomato - Kazusa and SolCAP markers mapped to genome   
Map version
105 (location: 50417)
Chromosome
11
Position
0.71 MB
Confidence
uncalculated
Protocol
unknown


Tomato - Kazusa and SolCAP markers mapped to genome

Map: Kazusa F2-2000 genetic map   
Map version
103 (location: 48349)
Chromosome
11
Position
6.19 cM
Confidence
uncalculated
Protocol
unknown


Kazusa F2-2000 genetic map

Map: Eggplant-COSII   
Map version
63 (location: 42498)
Chromosome
11
Position
40.60 cM
Confidence
F(LOD3)
Protocol
RFLP


Eggplant-COSII

Map: Tomato-EXPEN 2000   
Map version
52 (location: 40117)
Chromosome
11
Position
3.00 cM
Confidence
CF(LOD3)
Protocol
RFLP


Tomato-EXPEN 2000

Map: Eggplant-LXM 2002   
Map version
29 (location: 8961)
Chromosome
11
Position
41.00 cM
Confidence
CF(LOD3)
Protocol
RFLP


Eggplant-LXM 2002

Map: Tomato-EXPEN 1992   
Map version
28 (location: 8960)
Chromosome
11
Position
9.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992

Map: Potato-TXB 1992   
Map version
27 (location: 8959)
Chromosome
11
Position
8.90 cM
Confidence
I(LOD2)
Protocol
RFLP


Potato-TXB 1992

Map: Tomato-EXPIMP 2001   
Map version
26 (location: 8965)
Chromosome
11
Position
0.00 cM
Confidence
F(LOD3)
Protocol
RFLP


Tomato-EXPIMP 2001
Overgo hybridization and physical mapping 
TG629 was used as an overgo probe on plate 1 [well C9]

Plausible BAC Matches:   P038I12,   P290G08

 Non-Plausible BAC matches

 Overgo Sequences

A sequence
TCAAGTTCCAGAGGGAGCACAATG
B sequence
GTTTGCATCTCTGTTCCATTGTGC
AB sequence
TCAAGTTCCAGAGGGAGCACAATGGAACAG
Marker sequence
TACTCAACTAGCAGCAAACTAGATATTTTATTATGTATCTATTTTCTAAA
ATTTGTATAATGTTATCTACTTCTACTGGCACCCATGCTACAAGAAGCTT
AAATGGTGCACTTTATTGAATACAACAAAGATTTCAAGCCATGCTGAGAA
GACTACTGAAAGAGAGAGTCTCATACATACACTGAATGATGATATGAATT
ATCTTTCTTTTCTAACAATTGCATGAAAAGAGCAGTTAAATCTTAAATGA
GTTGTTCTAGTTCAGATGAATAGACAGGGCAAGAGGATCATCTTCTATCT
TTATGCAGAACAGTGATTGATAGGCTTAACAGAATTGGCAACACACAACA
TACTACTCAAAATGAACATAAACAGATACATCAAGTTCCAGAGGGAGCAC
AATGGAACAGAGATGCAAACTGACGACACTATTAACATAGGCAAGAATTG
CCTTTCGGTTCAGACAATATCTCAAACGAGATGGTAATATGCTTTGCTGA
ATAAGAC
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG629  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D355 marker 355
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)