SGN Marker TG498
SGN-M390
Synonyms |
Locus associations |
RFLP details |
Insert size
700
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
AAAAATTAACGGATTCTGCCCACCGTAGCCTTGCGGATCACCTCACTGCCTCTCGCATGGATGACCTTCTTAGTTATCCTGATAGGCTGT
CTGAAGAAATAGTCAAATGCATATCTTGTATATACTGCAAATTTGCCAATCCCAATATTCTTGCTCCAAAGGGATTATCAGTTTCTTCTA CTTCGTCATTGTCATCATCAAGCACATTTTCTCCGAGAAATCTTTCGGGCAGCTGGAGCTCACATCACAATGAGGAGAGCACTGAGCAGT ATGAATTTGAAGTGATAGAAATTTTGAAGATATGTCTAGATGATGATAGTTTCAATTATGCCACAACAATGCTGCATAAGTTCAGGTTAT TTGCAACAAACACAAGTAGTTCAAATAGAGTTAAAGAGTACAAAAATCTTCAATACCTGCTAGTGTGGACTTGATTAAAAAGCATGTTAA G |
Reverse sequence
GGAGACAGCTTGCATGCCTGCAGAGCATCAACGTAGTAAAAATAAAACTTATATACTACTATATTGAGTATATTCAGATTGTATTGTCAT
TTCTCCATTTAGAAGTTGCATCTTCTCTTTAGCCTTGATTGGTGGAGAAAGGAGGGAGAAAAGTGACAATTATTTATAAAAACAATTTCT GATGCAGTAGAACTTACCATTTAGATGGAACATTTTACAGCTTTCAAATTAGTATGACAAATTCAAATTGGTGAATTAAGCTTGTCGAAC ACTTCTTAACATGCTTTTTAATCAAGTCCACACTAGCAGGTATTGAAGATTTTTGTACTCTTTAACTCTATTTGAACTACTTGTGTTTGT TGCAAATAACCTGAACTTATGCAGCATTGTTGTGGCATAATTGAAACTATCATCATCTAGACATATCTTCAAAATTTCTATCACTTCAAA TTCATACTGCTCAGTGCTCTCCTCATTGTGATGTGAGCTCCAG |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U152213 | 356 (78.9% of RFLP seq) | + | |
SGN-U152213 | 7.3e-65 | 124 (25.2% of RFLP seq) | - |
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| ![]() Tomato QTL map |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 1992 |
Other PCR data |
|
Overgo hybridization and physical mapping |
TG498 was used as an overgo probe on plate 9 [well C10]
Plausible BAC Matches: P120F21, P122M18
Overgo Sequences
A sequence
TGGAGCTCACATCACAATGAGGAG
|
B sequence
CATACTGCTCAGTGCTCTCCTCAT
|
AB sequence
TGGAGCTCACATCACAATGAGGAGAGCACT
|
Marker sequence
AAAAATTAACGGATTCTGCCCACCGTAGCCTTGCGGATCACCTCACTGCC
TCTCGCATGGATGACCTTCTTAGTTATCCTGATAGGCTGTCTGAAGAAAT AGTCAAATGCATATCTTGTATATACTGCAAATTTGCCAATCCCAATATTC TTGCTCCAAAGGGATTATCAGTTTCTTCTACTTCGTCATTGTCATCATCA AGCACATTTTCTCCGAGAAATCTTTCGGGCAGCTGGAGCTCACATCACAA TGAGGAGAGCACTGAGCAGTATGAATTTGAAGTGATAGAAATTTTGAAGA TATGTCTAGATGATGATAGTTTCAATTATGCCACAACAATGCTGCATAAG TTCAGGTTATTTGCAACAAACACAAGTAGTTCAAATAGAGTTAAAGAGTA CAAAAATCTTCAATACCTGCTAGTGTGGACTTGATTAAAAAGCATGTTAA G |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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