SGN Marker TG582

SGN-M439

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1300
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG582 image not available
Forward sequence
TACACACCAATATTACAACTAGTAATTTTCCCAGATTTAAAGTAGAAGATAGTTTTGAAGATTTGTTATACTAATATTTTTCAGGTCCAG
TAGCTCAGGATATGTTTCATTGGCAAGCAACTATTATTGGTCCAAATGATAGCCCTTATGCTGGTGGTGTTTTCCAAGTCACCATCCATT
TTCCTCCTGATTACCCTTTCAAACCTCCCAAGGTATGTTTTCAATTGATCACTTTCCACAAAGGGACTGCTGATATTAAGTTTTCATATA
TATATTGACAGGTGGCTTTCACGACCATAGTTTTTCATCCAAATATAAACAATAATGGAAATATTTGTTTGGACATACTGAAGGATCAAT
GGAGTCCTGCCCTCACCATATCCAAGGTGCTACTGCTTTCTAGCTCTTCCTTTTCCTCAATGCTTTACTATTTCATGAATCAAAAGGGAT
ACACATTAGTTAGTGTTTGGTTGCTGGCTAACATAAAAATA
Reverse sequence
GGAGACAGCTTGCATGCCTGCAGCAGATGCCTTCTTTGCAGCACCTTGCGATACATCCAGTTCCAGAAGGATAAAGGTGGTGCAGTTGGG
GAGAAATTCGAGTCCATCAACTCATAATCAAATAGCATTTCTCAAAGGAATTACGTTCTTGGTGTCACAGAAGCAGAACATTTTTCTTAC
AAAGTACAAAATTGATTCCTTTTCAACTTGCTCTAGAGAAAAATGCATTTGACAACGGACTAGCAGAAGCAGCTGAAAAGATGCATATAT
ACTGACCACACCCCTACGCAGTAATATCCTAATAAAGATTGTTATTGTTGTAACAATTTGCTCTCCAGCTATGACTTCCGAGTGCCTGCC
ACTGTTACTTTTTTTTTTTTTTTTGGTGGAGAGTAGGTTTTCTTTTGAGGTGGAAGAGACAAGGAGTGGAGAAGTAGTTCATTAATTTGT
AGTTCAGAAATGTGATTATGACGAGTACTAGAATAATTTGTCCCTCAGTTTTGTATAACATGTTCTGTCCCATTTAACACATTTCGCAG
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1437163.5e-0572 (14.7% of RFLP seq)+
SGN-U1437153.5e-0572 (14.7% of RFLP seq)+
SGN-U1438613.5e-0548 (9.8% of RFLP seq)+
SGN-U1607193.5e-0572 (14.7% of RFLP seq)+
SGN-U1607188.7e-0673 (14.9% of RFLP seq)+
SGN-U1437148.7e-0677 (15.7% of RFLP seq)+
SGN-U1438628.7e-06117 (23.8% of RFLP seq)+
SGN-U1615162.2e-06106 (21.6% of RFLP seq)+
SGN-U1455212.2e-06106 (21.6% of RFLP seq)+
SGN-U1437142.2e-0690 (18.3% of RFLP seq)+
SGN-U1436553.6e-0877 (15.7% of RFLP seq)+
SGN-U1437163.7e-1178 (15.9% of RFLP seq)+
SGN-U1607193.7e-1178 (15.9% of RFLP seq)+
SGN-U1437153.7e-1178 (15.9% of RFLP seq)+
SGN-U1436549.4e-12131 (26.7% of RFLP seq)+
SGN-U1662801.2e-29133 (27.1% of RFLP seq)+
SGN-U1662808.1e-37109 (22.2% of RFLP seq)+
SGN-U1474061.5e-78147 (27.3% of RFLP seq)-
SGN-U147406353 (65.5% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9176)
Chromosome
2
Position
33.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG582 was used as an overgo probe on plate 16 [well G2]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

P154J04,   P115M23,   P127E07,   P083C13,   P058J19,   P175I12,   P158F22,   P115O23,   P086J06,   P117D11,   P230B15,   P023K06,   P174E04

 Overgo Sequences

A sequence
GATAGCCCTTATGCTGGTGGTGTT
B sequence
GGATGGTGACTTGGAAAACACCAC
AB sequence
GATAGCCCTTATGCTGGTGGTGTTTTCCAA
Marker sequence
TACACACCAATATTACAACTAGTAATTTTCCCAGATTTAAAGTAGAAGAT
AGTTTTGAAGATTTGTTATACTAATATTTTTCAGGTCCAGTAGCTCAGGA
TATGTTTCATTGGCAAGCAACTATTATTGGTCCAAATGATAGCCCTTATG
CTGGTGGTGTTTTCCAAGTCACCATCCATTTTCCTCCTGATTACCCTTTC
AAACCTCCCAAGGTATGTTTTCAATTGATCACTTTCCACAAAGGGACTGC
TGATATTAAGTTTTCATATATATATTGACAGGTGGCTTTCACGACCATAG
TTTTTCATCCAAATATAAACAATAATGGAAATATTTGTTTGGACATACTG
AAGGATCAATGGAGTCCTGCCCTCACCATATCCAAGGTGCTACTGCTTTC
TAGCTCTTCCTTTTCCTCAATGCTTTACTATTTCATGAATCAAAAGGGAT
ACACATTAGTTAGTGTTTGGTTGCTGGCTAACATAAAAATA
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG582  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D439 marker 439
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