SGN Marker CT68
SGN-M44
Synonyms |
Locus associations |
RFLP details |
Insert size
1100
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Vector
pBLUESC
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Cutting Site
EcoR1
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Drug Resistance
AMP
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Image
CT68 image not available
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Forward sequence
CAGATCTACAGATGGAAGATCAATTGCAGACGATTGTCCGAGATCACTTGTAGAGCTGGAATCAATGTTACAAGCCAGAAAAGAAGCCTC
CTTCAAGCGGGAAAAATCCCTTGCTCATGCTTTTACTCAACAGGAATTGGATGAGATGGATGCTGTTTGTAGTGAAGAAAGAAATGAAAG GGAATTAGAAGAGACAGCGAATTGGCTAGACGAGTGGATGTCATCAAAGCAATGGAACAGAGGTTCATTTGACAGAACAGACTCTATAAA GACTGTTGAGAAGGACACGGCTAAGCCATATTGTAACATGGTTCTCAATGCTCTCAAGACACCACACTCTAGCCCACTTCGCAGACGGGC TAATAGTCCTCATTATACTGCTAATTCTCCCCATCACCAGAGATCATCACATTACGATTACTCGGCAATTCAACCACCAGCCACCCCACC CCCTTGTCAACCAGAACCTCTTCAAATGC |
Reverse sequence
CAGATCTAGAGATGGAAGCTCAATTGCAGACGATTGTCCGAGATCACTTGTAGAGCTGGAATCAATGTTACAAGCCAGAAAAGAAGCCTC
CTTCAAGCGGGAAAAATCCCTTGCTCATGCTTTTACTCAACAGGAATTGGATGAGATGGATATTGTTTGTAGTGAAGAAAGAAATGAAAG GGAATTAGAAGAGACAGCGAATTGGCTAGACGAGTGGATGTCATCAAAGCAATGGAACAGAGGTTCATTTGACAGAAGAGACTCTATAAA GACTGTTGAGATGGACACGGCTAAGCCATATTGTAACATGGTTCCAAATGCTCGAAGATCACAACACTCTAGCCCACTTCACAGACAGGC TAGTAGTCCTCATTATACTGCTAATTCTCCCCATCACCAGAGATCATCACATTACAATTACTCGGCAATTCAACCACCAGCCACCCCACC CCCTTGTCAACCAAAACCTCTTCAAATGCGCTCAACAAGCCCACGTAAAAGCCAATCAACTGCAAACAC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U152873 | 5.9e-50 | 107 (22.3% of RFLP seq) | + |
SGN-U152873 | 4.6e-66 | 134 (28.0% of RFLP seq) | + |
SGN-U152873 | 1.1e-54 | 107 (20.6% of RFLP seq) | - |
SGN-U152873 | 8.3e-71 | 134 (25.8% of RFLP seq) | - |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Other PCR data |
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Overgo hybridization and physical mapping |
CT68 was used as an overgo probe on plate 11 [well F10]
Plausible BAC Matches: P005L01, P182B24, P031J15, P134A11, P187J14, P031J14
Non-Plausible BAC matches
Overgo Sequences
A sequence
GCCAGAAAAGAAGCCTCCTTCAAG
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B sequence
CAAGGGATTTTTCCCGCTTGAAGG
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AB sequence
GCCAGAAAAGAAGCCTCCTTCAAGCGGGAA
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Marker sequence
CAGATCTACAGATGGAAGATCAATTGCAGACGATTGTCCGAGATCACTTG
TAGAGCTGGAATCAATGTTACAAGCCAGAAAAGAAGCCTCCTTCAAGCGG GAAAAATCCCTTGCTCATGCTTTTACTCAACAGGAATTGGATGAGATGGA TGCTGTTTGTAGTGAAGAAAGAAATGAAAGGGAATTAGAAGAGACAGCGA ATTGGCTAGACGAGTGGATGTCATCAAAGCAATGGAACAGAGGTTCATTT GACAGAACAGACTCTATAAAGACTGTTGAGAAGGACACGGCTAAGCCATA TTGTAACATGGTTCTCAATGCTCTCAAGACACCACACTCTAGCCCACTTC GCAGACGGGCTAATAGTCCTCATTATACTGCTAATTCTCCCCATCACCAG AGATCATCACATTACGATTACTCGGCAATTCAACCACCAGCCACCCCACC CCCTTGTCAACCAGAACCTCTTCAAATGC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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