SGN Marker CT125
SGN-M452
Synonyms |
Locus associations |
RFLP details |
Insert size
1600
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
Forward sequence
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTCGGCTTAAACGACGTTTTTAAATATCGTAAAACAAGTACAACATGGGGGAAGTTAC
CAATGTGATGGAGTTTGAAGCAATTGCAAAGCAAAAGTTGCCAAAAATGGGGTATGACTACTATGCATCTGGAACAAAGGATCAATGGAC TTTGGCTGAAAACAAAAATGCCTTTTCAAAAATTTTGTTTAGGCCTCGTATTCTTATTGATGTAAGCAAGATTGACTTAAGCACAAGCGT GCTCGGGTTCAATATCTCAATGCCTATCATGATTGCCCCAACAGCTATGCAGAAAATGGGTCATCCTGATGGTGAGTATGCTATAGCAAA AACACCATCGGCAGCAGGAACAATTATGACACTGTCCTCTTGGGGAACTTCAAGTGTCGAGGAGGTTAATTCAACAGGACCTGGCACCCG TTTTT |
Reverse sequence
not available
|
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U155242 | 8.1e-06 | 53 (11.6% of RFLP seq) | + |
SGN-U143618 | 3.9e-57 | 331 (72.7% of RFLP seq) | + |
SGN-U160589 | 6.3e-59 | 182 (40.0% of RFLP seq) | + |
SGN-U160592 | 5e-152 | 378 (83.1% of RFLP seq) | + |
SGN-U143497 | 408 (89.7% of RFLP seq) | + |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT125 was used as an overgo probe on plate 5 [well H2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GTGCTCGGGTTCAATATCTCAATG
|
B sequence
GGGCAATCATGATAGGCATTGAGA
|
AB sequence
GTGCTCGGGTTCAATATCTCAATGCCTATC
|
Marker sequence
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTCGGCTTAAACGACGTT
TTTAAATATCGTAAAACAAGTACAACATGGGGGAAGTTACCAATGTGATG GAGTTTGAAGCAATTGCAAAGCAAAAGTTGCCAAAAATGGGGTATGACTA CTATGCATCTGGAACAAAGGATCAATGGACTTTGGCTGAAAACAAAAATG CCTTTTCAAAAATTTTGTTTAGGCCTCGTATTCTTATTGATGTAAGCAAG ATTGACTTAAGCACAAGCGTGCTCGGGTTCAATATCTCAATGCCTATCAT GATTGCCCCAACAGCTATGCAGAAAATGGGTCATCCTGATGGTGAGTATG CTATAGCAAAAACACCATCGGCAGCAGGAACAATTATGACACTGTCCTCT TGGGGAACTTCAAGTGTCGAGGAGGTTAATTCAACAGGACCTGGCACCCG TTTTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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