SGN Marker CT175
SGN-M50
Synonyms |
Locus associations |
RFLP details |
Insert size
1000
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT175 image not available
|
Forward sequence
TTTTTTTTTTTTTTTTTTTTTTTTTGGATATTCTTTTTTATACTTTTCAAAGTTTTAAGCTTTTTGGAGTCCGTCAATGGCTGGAGTTTT
ATCAGTTCTAAGACGTATTTACCTCACACTTTACAATTGGGTTGTCTTTTTTGGATGGTTTCAAGTTTTTTATTTTGCTGCGAAAACTCT GAAAGAATCTGGGCATGAACATGTCTATGATGCTGTAAAGAAACCTTTGCTTTTAGCTCAAACCGCGGCCATTTTAGAGATACTTAATGG TTTAGTGGGTTTGGTAAGATCGCCAGTATCAGCAACGCTTCCACAAATAATTTCAAGATTATATGTAACCTGGGGTATTCT |
Reverse sequence
not available
|
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U162219 | 7.7e-24 | 55 (15.7% of RFLP seq) | + |
SGN-U162219 | 2.4e-39 | 93 (26.5% of RFLP seq) | + |
SGN-U147869 | 4.4e-53 | 108 (30.8% of RFLP seq) | + |
SGN-U147869 | 1.8e-89 | 185 (52.7% of RFLP seq) | + |
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| ![]() Potato meta-QTL consensus map |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT175 was used as an overgo probe on plate 8 [well A7]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GGGTTTGGTAAGATCGCCAGTATC
|
B sequence
TTGTGGAAGCGTTGCTGATACTGG
|
AB sequence
GGGTTTGGTAAGATCGCCAGTATCAGCAAC
|
Marker sequence
TTTTTTTTTTTTTTTTTTTTTTTTTGGATATTCTTTTTTATACTTTTCAA
AGTTTTAAGCTTTTTGGAGTCCGTCAATGGCTGGAGTTTTATCAGTTCTA AGACGTATTTACCTCACACTTTACAATTGGGTTGTCTTTTTTGGATGGTT TCAAGTTTTTTATTTTGCTGCGAAAACTCTGAAAGAATCTGGGCATGAAC ATGTCTATGATGCTGTAAAGAAACCTTTGCTTTTAGCTCAAACCGCGGCC ATTTTAGAGATACTTAATGGTTTAGTGGGTTTGGTAAGATCGCCAGTATC AGCAACGCTTCCACAAATAATTTCAAGATTATATGTAACCTGGGGTATTC T |
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